Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1759g00004 ATGTCCGTCAATCAATCAAAGTCCGATAAGAGCGACGCCGTGTACCGAAAATCCGGTCGATCCTCGAGCTTCAATCAGCAGCGAGGTTCCTACGGCAGAGGCGGAGGCGGCGGTGGCGGAGGGCCCGCGCCGTCGAGCACCTCGGCTTCATCACTCTCCACTAGCCGGAGTTTTAACAAGAGGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTTCCCAGGTGAATACAAATGAGTCTAATATTGCTTCTTCTGCCCGGACCAATCAGAATGGTACCCGTGTACAGCCGCAATCACATGGAACATCTGATGGGCCTGTTACAAAACCATCTGAATCATCAGCTACACAGAGGAGTGCTAGAGTTGTTCCAAAAGCTCCAACTTCTCAACTGCCCCCCATGAGATCTGATTCAGCTGCTCCTACAAGCCCTGCTAAGGATGCATCTAAGGCATTCCCTTTTCAATTTGGATCCATAATTCCTGGCTTGATGAATGGCATGGCAATTCCTGCTCGTACGAGCTCAGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCGTCACGACTCTTATAAATCTGTGCCTTCAGTGCCAACACCTGTTCCAAAGCAGCAGCAACCACCTAGGAACGATGCAGGTGTCACTGAACAATCTAATGCCAGGGAGACTCATATAGGGACTAAGGCAAAAAAGGATCCTCAGCTGTCAACTTTGACCCCGGCAAGCCAGATGCAGAAGCCTTCTGTTGTTCCTGTAACTGGAATTTCAATGGCAACGGCATATCACCAGTCACAGGCATCTTTACAGTTTGCTGGTCCTAATCCACAGATCCAATCTCAGGGTGTGTCAACGACATCCCTCCAGGTGCCTATACCAGTGCCTTTTCCAATTGGAAATGCTGCACACGTTCAACAGCCGGTTTTTGTTCCAGGTCTTCAACCTCTTCCAATGCATCCTCAGGGGATCATGCATCAAGGCCAAAACATGAGTTTCACTTCTCAAATGGGTCATCAGTTGTCCAATCAATTAGGCAACATGGGCATTGGCATTAGCCCCCAATATCCCCAGCAGCAAGGTGGAAAATTTGCTGGTCCGCGAAAAACTACTACTGTGAAGATAACTCATCCTGAGACGCATGAAGAACTGAGGCTTGATAATAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGTCACATCTGAACATACCTTCTCCATCTCAACCTGTTAAATCTTTTGCGCCTTCCCATCCTATGAACTATTATCCACCCAGCTCATATAATACCAATTCTCTCTATTTTCCAGCTTCTAGTTCTCTTCCGTTAACAAGTAGCCAGATAACACCTAATTCTCAGCCACCAATATTTAATTATCCTGCGAACCATGGTCCGCAAAATGTGGGTTTCATGAATTCACAATCACTTGGTTCCCTACCAGTTAATAAAACTATTATTCCTGGCATTGTTGAACCACCTATTCCTGAACATTCCAATGACGTGCCTAATGTGAAGTCAACAGGTACTTTGGGGGTAGCTTCCGTGACTATTAGGCCAAGTGGTGTGTCTGCTGTGGTGGACCCATTATTGTCCAATCCTGGTATTTCTGGTGGTCAAAATAAAGAATCCCCTAGTTCAGCACCATCTTGTGATGCTAGCTCCTCTGTGCCACAAAAAGGGGCTGAAACTTGTTCAGAAATCCCTTCACAACAGTCTAAGTTGCCCAGTGATTCTTTAGTTTTGAGTTCATTGTCAAAACAATCTGCTACTGTAACTGCTGAGAAGCTTACTGCTACTCCCTTGATGATGCCTTCGTCAGCTGTGAGCGAGGATTCTGTCTCAGTCGTGTCTAATAATGAAGGCAGAAGGATTGAATCTCTTAGAAGTTCCAGCTCTTTGAAGGATAATCAGAAGAAACCAGGGAAGAAAGGTCAATCACAGCATGAGGTCTCTTTACAGTCTCCTACAGTAGCTAATATGCCTTCTCGAGCTGTTGACTGTGGTATACCTGATACTGGAGTTTCTGAACCTGTAGGAGGTAAAACAAACCATTCTGAGGCAATTAACACTGAAGATCTTCCAACATGTGACACAATACCTAGTAGCATTTCTAGTGGTATTGAAGTGAAAACCAACTGCTATGCTGAAGTTTCTGCTTGTGTTTCAGCTGAACGATCTTGTGGTGAAGCTGCTGATAATTTGAAAAATCATAGGCATGATAAGTTGGATGAATCATCCGAAGGTAAACTATTAAGGTGTTATGATAAATATGATGAACCAAATATTAAATCTGGTGGAACAGAATTTAAGCAAACAGAAAAAGATGCTGCAAATGTAAACGCTGAGGTGTTAAACTTGAAAGCTGTACAGAAAGAACAGGATGAATCTGCAACTTGTATTGCAGAATGTGACATAACAGATCTGAAGTCTGCTGATCCTCCAGAAACAACTTCAAAGTACGTCATGGACAATTCTGAGAATGCTGGCGATGACTCAGTGTCTCTTTCAGTGTCAGGTACCAACGATAGACCAATTTTAGAACCAAATAAGATGAAAACTACATCTAAAGGGAGGAAGAAAAGAAAAGAGATTCTTCAAAAAGCAGATGCCGCTGGGTCTACTTCTGATCTTTATAATGCCTACAAGGGACCCGATGAAAAGAAAGAAGCTGTCTTGAGTTCAGAGAGCTCAGAAAGTGCTTCTACTTCCGGAAGTTTGAAGCATTTGCCCGCAGATGCTGCTCAGCCGGATGCTATAACAAGTGAGGATTGTGGACAAAGTAAAGCTGAACCCGACGACTGGGAGGATGCTGCTGATATGTCTACACCAAAACTGGTAGTTGCTGATAAATCTCAACAGGTCAGTGATGGAGATGGAGGCACAGCCAAAAAGTATTCTCGTGATTTCCTTTTGAAATTTGCAGAGCAATACACTGATCTTCCTGAAGGTTTTGAAATTGTGGCAGAAGTAACTGAGGCTTTGATGAGCACTAGTATTAATAGTTCTCATGTAATTGAGCGTGATACACAGCCTAGTCCTGGAAGAAATCTAGATAGGGCAGGTGGGATGTCTCGGATAGATCGCCGTGGGAATGGTGTGACTGAGGAAGACAGGTGGAATAAAGTTTCTAATGCATTTTATTCTGGACGTGGTTTGGATGGTATTGGAGGTAATGCGGGATTTCGATCTGGCCAAGGAGGAAATTTTGGGGTTTTAAGGAACCCTCGTCTACAGACACCTGTTCAATATGCTGGAGGGATCCTTTCTGGCCCAATGCAATCTGTGGGAAATCAGGGTGGAATGCAAAGAAATAGCCCCGATGGGGAGAGGTGGCAGCGTGCTTCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACTCCTCAAACTCCTTTACAATCGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAGCGGCAGATGTGGAAGAGGTAAAGCAGAGGCAGTTGAAAGCCATCTTGAACAAACTAACTCCCCAGAATTTTGATAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATTTTTGAGAAGGCTCTGATGGAGCCTACCTTCTGTGAAATGTATGCCAACTTCTGTTTACATCTGGCTTCTGAGTTGCCTGATTTCAGCGAGGACAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAGTGTCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAAGCAAATAAGGTTGATGAGGGTGAGGTCAAGCAGTCTAATGAAGAAAGGGAACAGAGAAGAGTCAAGGCAAGAAGACGCATGTTGGGTAACATCAGATTGATTGGAGAACTATATAAGAAGAGAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCTGATGAGGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATCGGGGAGATGATTGACCATCCCAAAGCCAAAGTACATATTGATGCATATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTAAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCTAAGAAGATTGAGGAGGTACACAGAGATGCTGCACACGAGAGGCAGGCCCAAGCTGGTAGGCTGGGTCGTGGTCCAGGCAACAATCAGTCTGCTAGAAGGAACCCCATGGATTTTGGTCCAAGAGGGTCATCTATGTTGTCTTCTCCTAATTCTCAGATGGGAGGACTGCGTGGGCTGCCTAATCAAGTTCGTGGGTATGGTGGTTATCAGGATGCTCGTTTTGAGGAAAGGCAATCTTATGAGGCTCGGACCTTATCAGTTCCTTTGCCTCAAAGATCCTTAGGTGATGATTCTATAACCTTGGGACCTCAAGGTGGTCTTGCTAGGGGAATGTCCATTAGAGGATCAACAGCAATTTCTAATTTGCCGATATCTGATGTGCTTTCTGTCCCTGGAGATTCTCATAGAATGACTACTGGTCTTAATGGTTATAGCAATACATCAGAGCGCTTACCATATAACTCAAGGGATGATCTTGCATCAAGATATATAACGGATAGGTTTTCAGGTTCAGCTGCTTATGATCAATCAAGTGCTCCAGAGCGTAATATAAACTATGGTAACAGAGACTTGAGGAATTCAGATCGGAATCTTGACAGATCTGTTGCAACTTCACCTCCTGCTCAATTGCAAGGGTCAATAGTCTCCCAGAATGCTTCTTCAGAGAAGGTTTGGCCAGAAGAACGACTGCGGGACATGTCCATGTCAGCAATCAGAGAATACTACAGTGCTAGAGATGAGAAAGAAGTTGCTTTATGTGTCAGAGATTTGAACTCTCCAAGCTATCATCCTTCCATGGTTTCACTCTGGGTCACAGACTCATTTGAGAAAAAGGACATAGAGAGAGATCTTTTAGCCAAACTGCTTGTCAACCTTGTGAAATCTCAGGATGGCACCTTGACTCAAGCTCAGCTCATCAAAGGGTTTGAATCTGTTCTTAGTACATTGGAAGATGCTGTTAATGATGCCCCCAGAGCAGCAGAGTTTCTTGGCCGTATTTTTGCAAAAGTCGTAACAGAGAGTGTAGTCACATTGAATGATATTGGCAAGTTAATACATGATGGTGGAGAGGAACCTGGGAGTCTCTTAGAAGCTGGACTTGCAGGTGATGTTCTTGGAAGCATTTTGGAGGTAATAAAATCTGAGAAAGGTGATGTGATTCTAAATGAGATTCGTTCAAGCTCTAACTTGAGGTTGGAGACTTTCCGGCCTCCTAATCCCATGACATCAAGGAAGTTGGAGAATTTTATTTAG 5430 0.4383 MSVNQSKSDKSDAVYRKSGRSSSFNQQRGSYGRGGGGGGGGPAPSSTSASSLSTSRSFNKRSNNAQGGQSRVNPSQVNTNESNIASSARTNQNGTRVQPQSHGTSDGPVTKPSESSATQRSARVVPKAPTSQLPPMRSDSAAPTSPAKDASKAFPFQFGSIIPGLMNGMAIPARTSSAPPNIDEQKRDQARHDSYKSVPSVPTPVPKQQQPPRNDAGVTEQSNARETHIGTKAKKDPQLSTLTPASQMQKPSVVPVTGISMATAYHQSQASLQFAGPNPQIQSQGVSTTSLQVPIPVPFPIGNAAHVQQPVFVPGLQPLPMHPQGIMHQGQNMSFTSQMGHQLSNQLGNMGIGISPQYPQQQGGKFAGPRKTTTVKITHPETHEELRLDNRADAYSDGGSSGARSHLNIPSPSQPVKSFAPSHPMNYYPPSSYNTNSLYFPASSSLPLTSSQITPNSQPPIFNYPANHGPQNVGFMNSQSLGSLPVNKTIIPGIVEPPIPEHSNDVPNVKSTGTLGVASVTIRPSGVSAVVDPLLSNPGISGGQNKESPSSAPSCDASSSVPQKGAETCSEIPSQQSKLPSDSLVLSSLSKQSATVTAEKLTATPLMMPSSAVSEDSVSVVSNNEGRRIESLRSSSSLKDNQKKPGKKGQSQHEVSLQSPTVANMPSRAVDCGIPDTGVSEPVGGKTNHSEAINTEDLPTCDTIPSSISSGIEVKTNCYAEVSACVSAERSCGEAADNLKNHRHDKLDESSEGKLLRCYDKYDEPNIKSGGTEFKQTEKDAANVNAEVLNLKAVQKEQDESATCIAECDITDLKSADPPETTSKYVMDNSENAGDDSVSLSVSGTNDRPILEPNKMKTTSKGRKKRKEILQKADAAGSTSDLYNAYKGPDEKKEAVLSSESSESASTSGSLKHLPADAAQPDAITSEDCGQSKAEPDDWEDAADMSTPKLVVADKSQQVSDGDGGTAKKYSRDFLLKFAEQYTDLPEGFEIVAEVTEALMSTSINSSHVIERDTQPSPGRNLDRAGGMSRIDRRGNGVTEEDRWNKVSNAFYSGRGLDGIGGNAGFRSGQGGNFGVLRNPRLQTPVQYAGGILSGPMQSVGNQGGMQRNSPDGERWQRASSFQQRGLIPSPTPQTPLQSMHKAEKKYEVGKAADVEEVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKVDEGEVKQSNEEREQRRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKVHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAHERQAQAGRLGRGPGNNQSARRNPMDFGPRGSSMLSSPNSQMGGLRGLPNQVRGYGGYQDARFEERQSYEARTLSVPLPQRSLGDDSITLGPQGGLARGMSIRGSTAISNLPISDVLSVPGDSHRMTTGLNGYSNTSERLPYNSRDDLASRYITDRFSGSAAYDQSSAPERNINYGNRDLRNSDRNLDRSVATSPPAQLQGSIVSQNASSEKVWPEERLRDMSMSAIREYYSARDEKEVALCVRDLNSPSYHPSMVSLWVTDSFEKKDIERDLLAKLLVNLVKSQDGTLTQAQLIKGFESVLSTLEDAVNDAPRAAEFLGRIFAKVVTESVVTLNDIGKLIHDGGEEPGSLLEAGLAGDVLGSILEVIKSEKGDVILNEIRSSSNLRLETFRPPNPMTSRKLENFI 1809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1759g00004 1809 Gene3D - 1160 1395 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 1590 1609 - -
Gabi1759g00004 1809 Pfam MA3 domain 1625 1734 IPR003891 -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 210 226 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 611 639 - -
Gabi1759g00004 1809 SUPERFAMILY ARM repeat 1617 1806 IPR016024 -
Gabi1759g00004 1809 FunFam Eukaryotic translation initiation factor 4G 1615 1808 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 1385 1449 - -
Gabi1759g00004 1809 Gene3D - 1615 1809 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 816 848 - -
Gabi1759g00004 1809 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 351 1809 IPR045208 GO:0003743
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 611 694 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 1252 1276 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 651 665 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 537 579 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 538 579 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 234 249 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 43 126 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 1 151 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 171 249 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 392 422 - -
Gabi1759g00004 1809 SMART if4_15 1160 1382 IPR003890 GO:0003723|GO:0005515
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 1009 1037 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 1433 1449 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 815 941 - -
Gabi1759g00004 1809 Coils Coil 1242 1262 - -
Gabi1759g00004 1809 SMART ma3_7 1622 1736 IPR003891 -
Gabi1759g00004 1809 ProSiteProfiles MI domain profile. 1621 1745 IPR003891 -
Gabi1759g00004 1809 FunFam Eukaryotic translation initiation factor 4G 1160 1395 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 401 422 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 1385 1408 - -
Gabi1759g00004 1809 Pfam MIF4G domain 1160 1382 IPR003890 GO:0003723|GO:0005515
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 1563 1609 - -
Gabi1759g00004 1809 MobiDBLite consensus disorder prediction 899 913 - -
Gabi1759g00004 1809 SUPERFAMILY ARM repeat 1156 1384 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1759g00004 Gabi-Chr1759 72711 82970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1759g00004 1 1808 Eukaryotic Initiation Factors Gene Family AT3G60240 47.043 0.0 1360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1759g00004 K03260 - gmx:100798562 2427.9