Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1759g00003 ATGTCCGTCAATCAATCAAAGTCCGATAAGAGCGACGCCGTGTACCGAAAATCCGGTCGATCCTCGAGCTTCAATCAGCAGCGAGGTTCCTACGGCAGAGGCGGAGGCGGCGGTGGCGGAGGGCCCGCGCCGTCGAGCACCTCGGCTTCATCACTCTCCACTAGCCGGAGTTTTAACAAGAGGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTTCCCAGGTGAATACAAATGAGTCTAATATTGCTTCTTCTGCCCGGACCAATCAGAATGGTACCCGTGTACAGCCGCAATCACATGGAACATCTGATGGGCCTGTTACAAAACCATCTGAATCATCAGCTACACAGAGGAGTGCTAGAGTTGTTCCAAAAGCTCCAACTTCTCAACTGCCCCCCATGAGATCTGATTCAGCTGCTCCTACAAGCCCTGCTAAGGTAGATGCATCTAAGGCATTCCCTTTTCAATTTGGATCCATAATTCCTGGCTTGATGAATGGCATGGCAATTCCTGCTCGTACGAGCTCAGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCGTCACGACTCTTATAAATCTGTGCCTTCAGTGCCAACACCTGTTCCAAAGCAGCAGCAACCACCTAGGAACGATGCAGGTGTCACTGAACAATCTAATGCCAGGGAGACTCATATAGGGACTAAGGCAAAAAAGGATCCTCAGCTGTCAACTTTGACCCCGGCAAGCCAGATGCAGAAGCCTTCTGTTGTTCCTGTAACTGGAATTTCAATGGCAACGGCATATCACCAGTCACAGGCATCTTTACAGTTTGCTGGTCCTAATCCACAGATCCAATCTCAGGGTGTGTCAACGACATCCCTCCAGGTGCCTATACCAGTGCCTTTTCCAATTGGAAATGCTGCACACGTTCAACAGCCGGTTTTTGTTCCAGGTCTTCAACCTCTTCCAATGCATCCTCAGGGGATCATGCATCAAGGCCAAAACATGAGTTTCACTTCTCAAATGGGTCATCAGTTGTCCAATCAATTAGGCAACATGGGCATTGGCATTAGCCCCCAATATCCCCAGCAGCAAGGTGGAAAATTTGCTGGTCCGCGAAAAACTACTACTGTGAAGATAACTCATCCTGAGACGCATGAAGAACTGAGGCTTGATAATAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGTCACATCTGAACATACCTTCTCCATCTCAACCTGTTAAATCTTTTGCGCCTTCCCATCCTATGAACTATTATCCACCCAGCTCATATAATACCAATTCTCTCTATTTTCCAGCTTCTAGTTCTCTTCCGTTAACAAGTAGCCAGATAACACCTAATTCTCAGCCACCAATATTTAATTATCCTGCGAACCATGGTCCGCAAAATGTGGGTTTCATGAATTCACAATCACTTGGTTCCCTACCAGTTAATAAAACTATTATTCCTGGCATTGTTGAACCACCTATTCCTGAACATTCCAATGACGTGCCTAATGTGAAGTCAACAGGTACTTTGGGGGTAGCTTCCGTGACTATTAGGCCAAGTGGTGTGTCTGCTGTGGTGGACCCATTATTGTCCAATCCTGGTATTTCTGGTGGTCAAAATAAAGAATCCCCTAGTTCAGCACCATCTTGTGATGCTAGCTCCTCTGTGCCACAAAAAGGGGCTGAAACTTGTTCAGAAATCCCTTCACAACAGTCTAAGTTGCCCAGTGATTCTTTAGTTTTGAGTTCATTGTCAAAACAATCTGCTACTGTAACTGCTGAGAAGCTTACTGCTACTCCCTTGATGATGCCTTCGTCAGCTGTGAGCGAGGATTCTGTCTCAGTCGTGTCTAATAATGAAGGCAGAAGGATTGAATCTCTTAGAAGTTCCAGCTCTTTGAAGGATAATCAGAAGAAACCAGGGAAGAAAGGTCAATCACAGCATGAGGTCTCTTTACAGTCTCCTACAGTAGCTAATATGCCTTCTCGAGCTGTTGACTGTGGTATACCTGATACTGGAGTTTCTGAACCTGTAGGAGCTGAACGATCTTGTGGTGAAGCTGCTGATAATTTGAAAAATCATAGGCATGATAAGTTGGATGAATCATCCGAAGGTAAACTATTAAGGTGTTATGATAAATATGATGAACCAAATATTAAATCTGGTGGAACAGAATTTAAGCAAACAGAAAAAGATGCTGCAAATGTAAACGCTGAGGTGTTAAACTTGAAAGCTGTACAGAAAGAACAGGATGAATCTGCAACTTGTATTGCAGAATGTGACATAACAGATCTGAAGTCTGCTGATCCTCCAGAAACAACTTCAAAGTACGTCATGGACAATTCTGAGAATGCTGGCGATGACTCAGTGTCTCTTTCAGTGTCAGGTACCAACGATAGACCAATTTTAGAACCAAATAAGATGAAAACTACATCTAAAGGGAGGAAGAAAAGAAAAGAGATTCTTCAAAAAGCAGATGCCGCTGGGTCTACTTCTGATCTTTATAATGCCTACAAGGGACCCGATGAAAAGAAAGAAGCTGTCTTGAGTTCAGAGAGCTCAGAAAGTGCTTCTACTTCCGGAAGTTTGAAGCATTTGCCCGCAGATGCTGCTCAGCCGGATGCTATAACAAGTGAGGATTGTGGACAAAGTAAAGCTGAACCCGACGACTGGGAGGATGCTGCTGATATGTCTACACCAAAACTGGTAGTTGCTGATAAATCTCAACAGGTCAGTGATGGAGATGGAGGCACAGCCAAAAAGTATTCTCGTGATTTCCTTTTGAAATTTGCAGAGCAATACACTGATCTTCCTGAAGGTTTTGAAATTGTGGCAGAAGTAACTGAGGCTTTGATGAGCACTAGTATTAATAGTTCTCATGTAATTGAGCGTGATACACAGCCTAGTCCTGGAAGAAATCTAGATAGGGCAGGTGGGATGTCTCGGATAGATCGCCGTGGGAATGGTGTGACTGAGGAAGACAGGTGGAATAAAGTTTCTAATGCATTTTATTCTGGACGTGGTTTGGATGGTATTGGAGGTAATGCGGGATTTCGATCTGGCCAAGGAGGAAATTTTGGGGTTTTAAGGAACCCTCGTCTACAGACACCTGTTCAATATGCTGGAGGGATCCTTTCTGGCCCAATGCAATCTGTGGGAAATCAGGGTGGAATGCAAAGAAATAGCCCCGATGGGGAGAGGTGGCAGCGTGCTTCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACTCCTCAAACTCCTTTACAATCGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAGCGGCAGATGTGGAAGAGGTAAAGCAGAGGCAGTTGAAAGCCATCTTGAACAAACTAACTCCCCAGAATTTTGATAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATTTTTGAGAAGGCTCTGATGGAGCCTACCTTCTGTGAAATGTATGCCAACTTCTGTTTACATCTGGCTTCTGAGTTGCCTGATTTCAGCGAGGACAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAGTGTCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAAGCAAATAAGGTTGATGAGGGTGAGGTCAAGCAGTCTAATGAAGAAAGGGAACAGAGAAGAGTCAAGGCAAGAAGACGCATGTTGGGTAACATCAGATTGATTGGAGAACTATATAAGAAGAGAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCTGATGAGGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATCGGGGAGATGATTGACCATCCCAAAGCCAAAGTACATATTGATGCATATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTAAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCTAAGAAGATTGAGGAGGTACACAGAGATGCTGCACACGAGAGGCAGGCCCAAGCTGGTAGGCTGGGTCGTGGTCCAGGCAACAATCAGTCTGCTAGAAGGAACCCCATGGATTTTGGTCCAAGAGGGTCATCTATGTTGTCTTCTCCTAATTCTCAGATGGGAGGACTGCGTGGGCTGCCTAATCAAGTTCGTGGGTATGGTGGTTATCAGGATGCTCGTTTTGAGGAAAGGCAATCTTATGAGGCTCGGACCTTATCAGTTCCTTTGCCTCAAAGATCCTTAGGTGATGATTCTATAACCTTGGGACCTCAAGGTGGTCTTGCTAGGGGAATGTCCATTAGAGGATCAACAGCAATTTCTAATTTGCCGATATCTGATGTGCTTTCTGTCCCTGGAGATTCTCATAGAATGACTACTGGTCTTAATGGTTATAGCAATACATCAGAGCGCTTACCATATAACTCAAGGGATGATCTTGCATCAAGATATATAACGGATAGGTTTTCAGGTTCAGCTGCTTATGATCAATCAAGTGCTCCAGAGCGTAATATAAACTATGGTAACAGAGACTTGAGGAATTCAGATCGGAATCTTGACAGATCTGTTGCAACTTCACCTCCTGCTCAATTGCAAGGGTCAATAGTCTCCCAGAATGCTTCTTCAGAGAAGGTTTGGCCAGAAGAACGACTGCGGGACATGTCCATGTCAGCAATCAGAGAATACTACAGTGCTAGAGATGAGAAAGAAGTTGCTTTATGTGTCAGAGATTTGAACTCTCCAAGCTATCATCCTTCCATGGTTTCACTCTGGGTCACAGACTCATTTGAGAAAAAGGACATAGAGAGAGATCTTTTAGCCAAACTGCTTGTCAACCTTGTGAAATCTCAGGATGGCACCTTGACTCAAGCTCAGCTCATCAAAGGGTTTGAATCTGTTCTTAGTACATTGGAAGATGCTGTTAATGATGCCCCCAGAGCAGCAGAGTTTCTTGGCCGTATTTTTGCAAAAGTCGTAACAGAGAGTGTAGTCACATTGAATGATATTGGCAAGTTAATACATGATGGTGGAGAGGAACCTGGGAGTCTCTTAGAAGCTGGACTTGCAGGTGATGTTCTTGGAAGCATTTTGGAGGTAATAAAATCTGAGAAAGGTGATGTGATTCTAAATGAGATTCGTTCAAGCTCTAACTTGAGGTTGGAGACTTTCCGGCCTCCTAATCCCATGACATCAAGGAAGTTGGAGAATTTTATTTAG 5304 0.4397 MSVNQSKSDKSDAVYRKSGRSSSFNQQRGSYGRGGGGGGGGPAPSSTSASSLSTSRSFNKRSNNAQGGQSRVNPSQVNTNESNIASSARTNQNGTRVQPQSHGTSDGPVTKPSESSATQRSARVVPKAPTSQLPPMRSDSAAPTSPAKVDASKAFPFQFGSIIPGLMNGMAIPARTSSAPPNIDEQKRDQARHDSYKSVPSVPTPVPKQQQPPRNDAGVTEQSNARETHIGTKAKKDPQLSTLTPASQMQKPSVVPVTGISMATAYHQSQASLQFAGPNPQIQSQGVSTTSLQVPIPVPFPIGNAAHVQQPVFVPGLQPLPMHPQGIMHQGQNMSFTSQMGHQLSNQLGNMGIGISPQYPQQQGGKFAGPRKTTTVKITHPETHEELRLDNRADAYSDGGSSGARSHLNIPSPSQPVKSFAPSHPMNYYPPSSYNTNSLYFPASSSLPLTSSQITPNSQPPIFNYPANHGPQNVGFMNSQSLGSLPVNKTIIPGIVEPPIPEHSNDVPNVKSTGTLGVASVTIRPSGVSAVVDPLLSNPGISGGQNKESPSSAPSCDASSSVPQKGAETCSEIPSQQSKLPSDSLVLSSLSKQSATVTAEKLTATPLMMPSSAVSEDSVSVVSNNEGRRIESLRSSSSLKDNQKKPGKKGQSQHEVSLQSPTVANMPSRAVDCGIPDTGVSEPVGAERSCGEAADNLKNHRHDKLDESSEGKLLRCYDKYDEPNIKSGGTEFKQTEKDAANVNAEVLNLKAVQKEQDESATCIAECDITDLKSADPPETTSKYVMDNSENAGDDSVSLSVSGTNDRPILEPNKMKTTSKGRKKRKEILQKADAAGSTSDLYNAYKGPDEKKEAVLSSESSESASTSGSLKHLPADAAQPDAITSEDCGQSKAEPDDWEDAADMSTPKLVVADKSQQVSDGDGGTAKKYSRDFLLKFAEQYTDLPEGFEIVAEVTEALMSTSINSSHVIERDTQPSPGRNLDRAGGMSRIDRRGNGVTEEDRWNKVSNAFYSGRGLDGIGGNAGFRSGQGGNFGVLRNPRLQTPVQYAGGILSGPMQSVGNQGGMQRNSPDGERWQRASSFQQRGLIPSPTPQTPLQSMHKAEKKYEVGKAADVEEVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKVDEGEVKQSNEEREQRRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKVHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAHERQAQAGRLGRGPGNNQSARRNPMDFGPRGSSMLSSPNSQMGGLRGLPNQVRGYGGYQDARFEERQSYEARTLSVPLPQRSLGDDSITLGPQGGLARGMSIRGSTAISNLPISDVLSVPGDSHRMTTGLNGYSNTSERLPYNSRDDLASRYITDRFSGSAAYDQSSAPERNINYGNRDLRNSDRNLDRSVATSPPAQLQGSIVSQNASSEKVWPEERLRDMSMSAIREYYSARDEKEVALCVRDLNSPSYHPSMVSLWVTDSFEKKDIERDLLAKLLVNLVKSQDGTLTQAQLIKGFESVLSTLEDAVNDAPRAAEFLGRIFAKVVTESVVTLNDIGKLIHDGGEEPGSLLEAGLAGDVLGSILEVIKSEKGDVILNEIRSSSNLRLETFRPPNPMTSRKLENFI 1767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 1343 1366 - -
Gabi1759g00003 1767 SUPERFAMILY ARM repeat 1114 1342 IPR016024 -
Gabi1759g00003 1767 SUPERFAMILY ARM repeat 1575 1764 IPR016024 -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 235 250 - -
Gabi1759g00003 1767 Pfam MA3 domain 1583 1692 IPR003891 -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 612 688 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 1210 1234 - -
Gabi1759g00003 1767 FunFam Eukaryotic translation initiation factor 4G 1118 1353 - -
Gabi1759g00003 1767 FunFam Eukaryotic translation initiation factor 4G 1573 1766 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 43 126 - -
Gabi1759g00003 1767 Gene3D - 1118 1353 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 967 995 - -
Gabi1759g00003 1767 Gene3D - 1573 1767 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 1343 1407 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 402 423 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 612 640 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 771 899 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 1521 1567 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 173 250 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 393 423 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 652 666 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 538 580 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 539 580 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 1391 1407 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 857 871 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 1 149 - -
Gabi1759g00003 1767 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 356 1767 IPR045208 GO:0003743
Gabi1759g00003 1767 ProSiteProfiles MI domain profile. 1579 1703 IPR003891 -
Gabi1759g00003 1767 Coils Coil 1200 1220 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 211 227 - -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 774 806 - -
Gabi1759g00003 1767 SMART if4_15 1118 1340 IPR003890 GO:0003723|GO:0005515
Gabi1759g00003 1767 SMART ma3_7 1580 1694 IPR003891 -
Gabi1759g00003 1767 MobiDBLite consensus disorder prediction 1548 1567 - -
Gabi1759g00003 1767 Pfam MIF4G domain 1118 1340 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1759g00003 Gabi-Chr1759 72711 82970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1759g00003 1 1766 Eukaryotic Initiation Factors Gene Family AT3G60240 47.021 0.0 1349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1759g00003 K03260 - gmx:100798562 2376.28