Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1759g00002 ATGTCCGTCAATCAATCAAAGTCCGATAAGAGCGACGCCGTGTACCGAAAATCCGGTCGATCCTCGAGCTTCAATCAGCAGCGAGGTTCCTACGGCAGAGGCGGAGGCGGCGGTGGCGGAGGGCCCGCGCCGTCGAGCACCTCGGCTTCATCACTCTCCACTAGCCGGAGTTTTAACAAGAGGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTTCCCAGGTGAATACAAATGAGTCTAATATTGCTTCTTCTGCCCGGACCAATCAGAATGGTACCCGTGTACAGCCGCAATCACATGGAACATCTGATGGGCCTGTTACAAAACCATCTGAATCATCAGCTACACAGAGGAGTGCTAGAGTTGTTCCAAAAGCTCCAACTTCTCAACTGCCCCCCATGAGATCTGATTCAGCTGCTCCTACAAGCCCTGCTAAGGTAGATGCATCTAAGGCATTCCCTTTTCAATTTGGATCCATAATTCCTGGCTTGATGAATGGCATGGCAATTCCTGCTCGTACGAGCTCAGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCGTCACGACTCTTATAAATCTGTGCCTTCAGTGCCAACACCTGTTCCAAAGCAGCAGCAACCACCTAGGAACGATGCAGGTGTCACTGAACAATCTAATGCCAGGGAGACTCATATAGGGACTAAGGCAAAAAAGGATCCTCAGCTGTCAACTTTGACCCCGGCAAGCCAGATGCAGAAGCCTTCTGTTGTTCCTGTAACTGGAATTTCAATGGCAACGGCATATCACCAGTCACAGGCATCTTTACAGTTTGCTGGTCCTAATCCACAGATCCAATCTCAGGGTGTGTCAACGACATCCCTCCAGGTGCCTATACCAGTGCCTTTTCCAATTGGAAATGCTGCACACGTTCAACAGCCGGTTTTTGTTCCAGGTCTTCAACCTCTTCCAATGCATCCTCAGGGGATCATGCATCAAGGCCAAAACATGAGTTTCACTTCTCAAATGGGTCATCAGTTGTCCAATCAATTAGGCAACATGGGCATTGGCATTAGCCCCCAATATCCCCAGCAGCAAGGTGGAAAATTTGCTGGTCCGCGAAAAACTACTACTGTGAAGATAACTCATCCTGAGACGCATGAAGAACTGAGGCTTGATAATAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGTCACATCTGAACATACCTTCTCCATCTCAACCTGTTAAATCTTTTGCGCCTTCCCATCCTATGAACTATTATCCACCCAGCTCATATAATACCAATTCTCTCTATTTTCCAGCTTCTAGTTCTCTTCCGTTAACAAGTAGCCAGATAACACCTAATTCTCAGCCACCAATATTTAATTATCCTGCGAACCATGGTCCGCAAAATGTGGGTTTCATGAATTCACAATCACTTGGTTCCCTACCAGTTAATAAAACTATTATTCCTGGCATTGTTGAACCACCTATTCCTGAACATTCCAATGACGTGCCTAATGTGAAGTCAACAGGTACTTTGGGGGTAGCTTCCGTGACTATTAGGCCAAGTGGTGTGTCTGCTGTGGTGGACCCATTATTGTCCAATCCTGGTATTTCTGGTGGTCAAAATAAAGAATCCCCTAGTTCAGCACCATCTTGTGATGCTAGCTCCTCTGTGCCACAAAAAGGGGCTGAAACTTGTTCAGAAATCCCTTCACAACAGTCTAAGTTGCCCAGTGATTCTTTAGTTTTGAGTTCATTGTCAAAACAATCTGCTACTGTAACTGCTGAGAAGCTTACTGCTACTCCCTTGATGATGCCTTCGTCAGCTGTGAGCGAGGATTCTGTCTCAGTCGTGTCTAATAATGAAGGCAGAAGGATTGAATCTCTTAGAAGTTCCAGCTCTTTGAAGGATAATCAGAAGAAACCAGGGAAGAAAGGTCAATCACAGCATGAGGTCTCTTTACAGTCTCCTACAGTAGCTAATATGCCTTCTCGAGCTGTTGACTGTGGTATACCTGATACTGGAGTTTCTGAACCTGTAGGAGGTAAAACAAACCATTCTGAGGCAATTAACACTGAAGATCTTCCAACATGTGACACAATACCTAGTAGCATTTCTAGTGGTATTGAAGTGAAAACCAACTGCTATGCTGAAGTTTCTGCTTGTGTTTCAGCTGAACGATCTTGTGGTGAAGCTGCTGATAATTTGAAAAATCATAGGCATGATAAGTTGGATGAATCATCCGAAGGTAAACTATTAAGGTGTTATGATAAATATGATGAACCAAATATTAAATCTGGTGGAACAGAATTTAAGCAAACAGAAAAAGATGCTGCAAATGTAAACGCTGAGGTGTTAAACTTGAAAGCTGTACAGAAAGAACAGGATGAATCTGCAACTTGTATTGCAGAATGTGACATAACAGATCTGAAGTCTGCTGATCCTCCAGAAACAACTTCAAAGTACGTCATGGACAATTCTGAGAATGCTGGCGATGACTCAGTGTCTCTTTCAGTGTCAGGTACCAACGATAGACCAATTTTAGAACCAAATAAGATGAAAACTACATCTAAAGGGAGGAAGAAAAGAAAAGAGATTCTTCAAAAAGCAGATGCCGCTGGGTCTACTTCTGATCTTTATAATGCCTACAAGGGACCCGATGAAAAGAAAGAAGCTGTCTTGAGTTCAGAGAGCTCAGAAAGTGCTTCTACTTCCGGAAGTTTGAAGCATTTGCCCGCAGATGCTGCTCAGCCGGATGCTATAACAAGTGAGGATTGTGGACAAAGTAAAGCTGAACCCGACGACTGGGAGGATGCTGCTGATATGTCTACACCAAAACTGGTAGTTGCTGATAAATCTCAACAGGTCAGTGATGGAGATGGAGGCACAGCCAAAAAGTATTCTCGTGATTTCCTTTTGAAATTTGCAGAGCAATACACTGATCTTCCTGAAGGTTTTGAAATTGTGGCAGAAGTAACTGAGGCTTTGATGAGCACTAGTATTAATAGTTCTCATGTAATTGAGCGTGATACACAGCCTAGTCCTGGAAGAAATCTAGATAGGGCAGGTGGGATGTCTCGGATAGATCGCCGTGGGAATGGTGTGACTGAGGAAGACAGGTGGAATAAAGTTTCTAATGCATTTTATTCTGGACGTGGTTTGGATGGTATTGGAGGTAATGCGGGATTTCGATCTGGCCAAGGAGGAAATTTTGGGGTTTTAAGGAACCCTCGTCTACAGACACCTGTTCAATATGCTGGAGGGATCCTTTCTGGCCCAATGCAATCTGTGGGAAATCAGGGTGGAATGCAAAGAAATAGCCCCGATGGGGAGAGGTGGCAGCGTGCTTCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACTCCTCAAACTCCTTTACAATCGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAGCGGCAGATGTGGAAGAGGTAAAGCAGAGGCAGTTGAAAGCCATCTTGAACAAACTAACTCCCCAGAATTTTGATAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATTTTTGAGAAGGCTCTGATGGAGCCTACCTTCTGTGAAATGTATGCCAACTTCTGTTTACATCTGGCTTCTGAGTTGCCTGATTTCAGCGAGGACAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAGTGTCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAAGCAAATAAGGTTGATGAGGGTGAGGTCAAGCAGTCTAATGAAGAAAGGGAACAGAGAAGAGTCAAGGCAAGAAGACGCATGTTGGGTAACATCAGATTGATTGGAGAACTATATAAGAAGAGAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCTGATGAGGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATCGGGGAGATGATTGACCATCCCAAAGCCAAAGTACATATTGATGCATATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTAAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCTAAGAAGATTGAGGAGGTACACAGAGATGCTGCACACGAGAGGCAGGCCCAAGCTGGTAGGCTGGGTCGTGGTCCAGGCAACAATCAGTCTGCTAGAAGGAACCCCATGGATTTTGGTCCAAGAGGGTCATCTATGTTGTCTTCTCCTAATTCTCAGATGGGAGGACTGCGTGGGCTGCCTAATCAAGTTCGTGGGTATGGTGGTTATCAGGATGCTCGTTTTGAGGAAAGGCAATCTTATGAGGCTCGGACCTTATCAGTTCCTTTGCCTCAAAGATCCTTAGGTGATGATTCTATAACCTTGGGACCTCAAGGTGGTCTTGCTAGGGGAATGTCCATTAGAGGATCAACAGCAATTTCTAATTTGCCGATATCTGATGTGCTTTCTGTCCCTGGAGATTCTCATAGAATGACTACTGGTCTTAATGGTTATAGCAATACATCAGAGCGCTTACCATATAACTCAAGGGATGATCTTGCATCAAGATATATAACGGATAGGTTTTCAGGTTCAGCTGCTTATGATCAATCAAGTGCTCCAGAGCGTAATATAAACTATGGTAACAGAGACTTGAGGAATTCAGATCGGAATCTTGACAGATCTGTTGCAACTTCACCTCCTGCTCAATTGCAAGGGTCAATAGTCTCCCAGAATGCTTCTTCAGAGAAGGTTTGGCCAGAAGAACGACTGCGGGACATGTCCATGTCAGCAATCAGAGAATACTACAGTGCTAGAGATGAGAAAGAAGTTGCTTTATGTGTCAGAGATTTGAACTCTCCAAGCTATCATCCTTCCATGGTTTCACTCTGGGTCACAGACTCATTTGAGAAAAAGGACATAGAGAGAGATCTTTTAGCCAAACTGCTTGTCAACCTTGTGAAATCTCAGGATGGCACCTTGACTCAAGCTCAGCTCATCAAAGGGTTTGAATCTGTTCTTAGTACATTGGAAGATGCTGTTAATGATGCCCCCAGAGCAGCAGAGTTTCTTGGCCGTATTTTTGCAAAAGTCGTAACAGAGAGTGTAGTCACATTGAATGATATTGGCAAGTTAATACATGATGGTGGAGAGGAACCTGGGAGTCTCTTAGAAGCTGGACTTGCAGGTGATGTTCTTGGAAGCATTTTGGAGGTAATAAAATCTGAGAAAGGTGATGTGATTCTAAATGAGATTCGTTCAAGCTCTAACTTGAGGTTGGAGACTTTCCGGCCTCCTAATCCCATGACATCAAGGAAGTTGGAGAATTTTATTTAG 5433 0.4382 MSVNQSKSDKSDAVYRKSGRSSSFNQQRGSYGRGGGGGGGGPAPSSTSASSLSTSRSFNKRSNNAQGGQSRVNPSQVNTNESNIASSARTNQNGTRVQPQSHGTSDGPVTKPSESSATQRSARVVPKAPTSQLPPMRSDSAAPTSPAKVDASKAFPFQFGSIIPGLMNGMAIPARTSSAPPNIDEQKRDQARHDSYKSVPSVPTPVPKQQQPPRNDAGVTEQSNARETHIGTKAKKDPQLSTLTPASQMQKPSVVPVTGISMATAYHQSQASLQFAGPNPQIQSQGVSTTSLQVPIPVPFPIGNAAHVQQPVFVPGLQPLPMHPQGIMHQGQNMSFTSQMGHQLSNQLGNMGIGISPQYPQQQGGKFAGPRKTTTVKITHPETHEELRLDNRADAYSDGGSSGARSHLNIPSPSQPVKSFAPSHPMNYYPPSSYNTNSLYFPASSSLPLTSSQITPNSQPPIFNYPANHGPQNVGFMNSQSLGSLPVNKTIIPGIVEPPIPEHSNDVPNVKSTGTLGVASVTIRPSGVSAVVDPLLSNPGISGGQNKESPSSAPSCDASSSVPQKGAETCSEIPSQQSKLPSDSLVLSSLSKQSATVTAEKLTATPLMMPSSAVSEDSVSVVSNNEGRRIESLRSSSSLKDNQKKPGKKGQSQHEVSLQSPTVANMPSRAVDCGIPDTGVSEPVGGKTNHSEAINTEDLPTCDTIPSSISSGIEVKTNCYAEVSACVSAERSCGEAADNLKNHRHDKLDESSEGKLLRCYDKYDEPNIKSGGTEFKQTEKDAANVNAEVLNLKAVQKEQDESATCIAECDITDLKSADPPETTSKYVMDNSENAGDDSVSLSVSGTNDRPILEPNKMKTTSKGRKKRKEILQKADAAGSTSDLYNAYKGPDEKKEAVLSSESSESASTSGSLKHLPADAAQPDAITSEDCGQSKAEPDDWEDAADMSTPKLVVADKSQQVSDGDGGTAKKYSRDFLLKFAEQYTDLPEGFEIVAEVTEALMSTSINSSHVIERDTQPSPGRNLDRAGGMSRIDRRGNGVTEEDRWNKVSNAFYSGRGLDGIGGNAGFRSGQGGNFGVLRNPRLQTPVQYAGGILSGPMQSVGNQGGMQRNSPDGERWQRASSFQQRGLIPSPTPQTPLQSMHKAEKKYEVGKAADVEEVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKVDEGEVKQSNEEREQRRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKVHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAHERQAQAGRLGRGPGNNQSARRNPMDFGPRGSSMLSSPNSQMGGLRGLPNQVRGYGGYQDARFEERQSYEARTLSVPLPQRSLGDDSITLGPQGGLARGMSIRGSTAISNLPISDVLSVPGDSHRMTTGLNGYSNTSERLPYNSRDDLASRYITDRFSGSAAYDQSSAPERNINYGNRDLRNSDRNLDRSVATSPPAQLQGSIVSQNASSEKVWPEERLRDMSMSAIREYYSARDEKEVALCVRDLNSPSYHPSMVSLWVTDSFEKKDIERDLLAKLLVNLVKSQDGTLTQAQLIKGFESVLSTLEDAVNDAPRAAEFLGRIFAKVVTESVVTLNDIGKLIHDGGEEPGSLLEAGLAGDVLGSILEVIKSEKGDVILNEIRSSSNLRLETFRPPNPMTSRKLENFI 1810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1759g00002 1810 Coils Coil 1243 1263 - -
Gabi1759g00002 1810 Pfam MIF4G domain 1161 1383 IPR003890 GO:0003723|GO:0005515
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 235 250 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 1386 1409 - -
Gabi1759g00002 1810 Gene3D - 1616 1810 - -
Gabi1759g00002 1810 FunFam Eukaryotic translation initiation factor 4G 1616 1809 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 1434 1450 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 816 942 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 900 914 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 43 126 - -
Gabi1759g00002 1810 SUPERFAMILY ARM repeat 1618 1807 IPR016024 -
Gabi1759g00002 1810 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 353 1810 IPR045208 GO:0003743
Gabi1759g00002 1810 Gene3D - 1161 1396 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 402 423 - -
Gabi1759g00002 1810 Pfam MA3 domain 1626 1735 IPR003891 -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 1010 1038 - -
Gabi1759g00002 1810 SMART if4_15 1161 1383 IPR003890 GO:0003723|GO:0005515
Gabi1759g00002 1810 SMART ma3_7 1623 1737 IPR003891 -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 612 640 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 1564 1610 - -
Gabi1759g00002 1810 FunFam Eukaryotic translation initiation factor 4G 1161 1396 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 1386 1450 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 173 250 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 612 695 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 393 423 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 652 666 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 538 580 - -
Gabi1759g00002 1810 ProSiteProfiles MI domain profile. 1622 1746 IPR003891 -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 539 580 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 1 149 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 817 849 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 1591 1610 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 211 227 - -
Gabi1759g00002 1810 MobiDBLite consensus disorder prediction 1253 1279 - -
Gabi1759g00002 1810 SUPERFAMILY ARM repeat 1157 1385 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1759g00002 Gabi-Chr1759 72711 82970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1759g00002 1 1809 Eukaryotic Initiation Factors Gene Family AT3G60240 47.151 0.0 1360