Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1752g00001 ATGGCTCCTACTTCTTGCTCAAGGAATGAGTTCAACCCCACCGATGATGAACTCATTCAATTGTTTCTTTACAATAAGATCAATGGGAACCCATTGCCTAAAGATGTTACTATTCTTGAATATGACTTATTTGGTATAAAGAACCCTTGGGAGATTTGGGAAGACTTTGCAGGTTCACATTCTTATCATGGAACTGACCTTTATTTCTTCACCACCCCAAAGAAAAAGTTCTCCACTTGGTCACGCTCGGTTCGCACCATTGAGTGTGGTTCATGGGAAGGTGAAGACAGTGGAAAAATTGTTGTGGCTAATGGCACGAAGCAATGTGTTGGGGTAAAGAGACGTTTACGTTTTGAAAAGAGTGGCACCGACAATGATGGTGCTTGGATCTTGCATGAATATAGCATTGATTCATCATTGTTAAACAATTCATCTGCCAACAATTATGTTCTATGCAGGTTAAGAAAGAATATACGACATGATGATTATAACAAAAAGAATTTAAATAGAACTAGGCAAGAAGAGATCAAGGTGACCCAACAAAGGAAGAGAGTTGTTCTTGGACTTCGAGCTCCCACCGCATATGTCGATAGGAATGTTTGTTCGGGGGAAGACATTCATCAAGAACCAAGAAAACAAGTTGAATGTGGAGACAAGAGAACCAAAGAGGTTATGATTTCCGCAAGAACTGAGTTGGTATATAAGGAAGACGAAGATGATGATCTCACCATGATTTGGCCAGAGTTATTTTCGTTGCAGTTGAGAAAGGCTAATGGAGGCTTAGTCCAAGAGAAAGAGATCCAAATGCTTCCCAATACATTTTACTATGAGTTGTTGTTGGAGAGGTTACCGCCATTCTACATATGA 867 0.3991 MAPTSCSRNEFNPTDDELIQLFLYNKINGNPLPKDVTILEYDLFGIKNPWEIWEDFAGSHSYHGTDLYFFTTPKKKFSTWSRSVRTIECGSWEGEDSGKIVVANGTKQCVGVKRRLRFEKSGTDNDGAWILHEYSIDSSLLNNSSANNYVLCRLRKNIRHDDYNKKNLNRTRQEEIKVTQQRKRVVLGLRAPTAYVDRNVCSGEDIHQEPRKQVECGDKRTKEVMISARTELVYKEDEDDDLTMIWPELFSLQLRKANGGLVQEKEIQMLPNTFYYELLLERLPPFYI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1752g00001 288 PANTHER NAC TRANSCRIPTION FACTOR 56 10 198 - -
Gabi1752g00001 288 SUPERFAMILY NAC domain 11 156 IPR036093 GO:0003677|GO:0006355
Gabi1752g00001 288 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Gabi1752g00001 288 ProSiteProfiles NAC domain profile. 5 157 IPR003441 GO:0003677|GO:0006355
Gabi1752g00001 288 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1752g00001 Gabi-Chr1752 66662 67972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1752g00001 11 177 NAC Transcription Factor Family AT1G77450 32.000 3.63e-15 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi1752g00001 NAM 7.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1752g00001 - - mtr:11433340 266.544