Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1751g00004 ATGGCTTCTTCAATTCGTCCCTCACTTTCTTCCTTTAGGTTACCCTCTCTCTCTTCCTGCTACCCTTCTCAAAGGTTCTCTCTTTTTCATATTGGTAGCGCTGTTAGACAATCCCATAATTTTGGGTTGAAAGCATTAAGGTTGTTGAGACATGATGTTAACTACATGAGAGTGATGGCATCTGGGAACATGTCACCAGCTGCTACCCAGGAAAATGTACTAGATTGGGTAAAACATGACAAGAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAGGACCATAAAATTTTATACAGAGTGCCTTGGAATGAAGTTGCTCAGAAAGCGTGACATGCCAGAGGAGAGATATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGTTATTGAACTGACATACAATTATGGGATTGAGAGTTATAATATTGGAACCGGGTTTGGCCATTTTGGTCTTGCTGTTGATGATATTTCAAGAGTAGTGGATATCATAAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGCAGCTCGGTAATTGCATTTATTGAAGATCCTGATGGTTATACTTTTGAACTTTTGGAAAGGGCTCCCTCTCCTGAGCCTTTATGCCAAGTAATGCTTCGGGTGGGTGATCTTGATCGTTCCATAAAATTTTATGAAAAGGCTTTTGGTATGGAGCTACTTCGTACACGAGATAATCCGGAATCCAAGTATACCATAGCAATGCTGGGATATGGTCCAGAAGATAAAAATACTGTTCTGGAGTTGACTTACAACTATGGAGTCACAGAATATGATAAAGGAGACGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAGAACTGCAGAAGCAATTAAACTTGCTGGAGGAAAGATTACTAGGGAACCTGGACCAGTTCCTGGTATCAAAACAAAAATTACAGCATGCTCGGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTTCATAAGGAGTTGGAGTAG 1038 0.4133 MASSIRPSLSSFRLPSLSSCYPSQRFSLFHIGSAVRQSHNFGLKALRLLRHDVNYMRVMASGNMSPAATQENVLDWVKHDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDMPEERYTNAFLGYGPEDAHFVIELTYNYGIESYNIGTGFGHFGLAVDDISRVVDIIRAKGGKITREPGPVKGGSSVIAFIEDPDGYTFELLERAPSPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRTRDNPESKYTIAMLGYGPEDKNTVLELTYNYGVTEYDKGDAYAQIAIGTDDVYRTAEAIKLAGGKITREPGPVPGIKTKITACSDPDGWKTVFVDNVDFHKELE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1751g00004 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 84 204 IPR004360 -
Gabi1751g00004 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 216 331 IPR004360 -
Gabi1751g00004 345 ProSitePatterns Glyoxalase I signature 1. 86 107 IPR018146 GO:0004462|GO:0046872
Gabi1751g00004 345 Gene3D - 210 345 IPR029068 -
Gabi1751g00004 345 ProSitePatterns Glyoxalase I signature 1. 216 237 IPR018146 GO:0004462|GO:0046872
Gabi1751g00004 345 FunFam Lactoylglutathione lyase 210 345 - -
Gabi1751g00004 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 213 337 IPR037523 -
Gabi1751g00004 345 ProSitePatterns Glyoxalase I signature 2. 150 162 IPR018146 GO:0004462|GO:0046872
Gabi1751g00004 345 PANTHER LACTOYLGLUTATHIONE LYASE 59 345 - -
Gabi1751g00004 345 Gene3D - 54 209 IPR029068 -
Gabi1751g00004 345 NCBIfam lactoylglutathione lyase 83 208 IPR004361 GO:0004462|GO:0046872
Gabi1751g00004 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 214 337 IPR029068 -
Gabi1751g00004 345 CDD GlxI_Ni 214 335 - -
Gabi1751g00004 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 209 IPR029068 -
Gabi1751g00004 345 CDD GlxI_Ni 84 205 - -
Gabi1751g00004 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 83 207 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1751g00004 Gabi-Chr1751 38374 42050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1751g00004 216 334 Calmodulin-binding Proteins AT1G08110 26.897 2.65e-09 55.1