Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1737g00005 ATGGAAGCTCCCATTGCAGAAGATGGGAATCTCAGGGTTTTGGACAAGAGTGGGAAATCATACTGGGGCACTAGTGTTGAAAGATCATCTTCACAGAACAGGACAGTGAAGCTAATGGACAACGGGAACCTTATTTTAAGGATGAAAATGGATGAGAGTTTAGCATTAACTTCATGGAGAAGTTATGAAGACCCAACACCAGGGAACTTCTCTTTTGAGCAAGATCAGGGAGAGAACCAGTATATCATATGGAAGAGATCAATGAGATATTGGAAAAGCAGTGTATTAGGTAAATTTGTTGGAACTGGTGAGATGTCTTCAGCAATATCTTACTTGTTGTCAAATTTCACCTTGAGAATATCCCCAAACAACACTGTTCCCTTTCTCACTTCATCTCTATATAGTGACACAAGGTTGGTAATGACTTACTGGGGTCAACTTCAGTATAAGAAGATGGATACAGAGAAAAAATGGTTGTTAGTTTGGGTAGAGCCTAGAGATAGATGCAGTGTGTTTAATGCATGTGGAAACTTTGGTAGCTGTAATAGCAAGTATGATTCTATGTGCAAGTGTTTGCCTGGGTTTAAGCCTAATTCCCAAGAGAGTTGGAATGCTGGAGATTTTTCAGGTGGATGTAGCAGGAAAACAAATGTATGTAGTGAGGATGCCAACAGTGACACGTTTTTGAGCTTAAAAATGATGAAAGTAGGGAACCCGGATGCTCAATTTAATGCTAAGAATGAAGAGGAATGCAAGTCAGAGTGCCTCAACAATTGCCAGTGCTGTGCTTATTCATATGAAGACACTGAAAAGACAAGGCAGGGGAATGTTGGTGATGCTGTTTGCTGGATTTGGTCTGAGGATTTGAACAATCTAGAAGAAGAGTATGATGATGGTTGTGACCTGAATGTTCGCGTGGCATTTTCTGATATAGAATCCAGTAGGAGCAGTTGTGGGACTTGTGGCACAAACTTCATTCCATATCCTCTTAGCACAAGACCAAATTGTGGTGACCCCATATACTCCAGTTTTCACTGCAACATTTCCACTGGTGAGCTTGACTTTGAGACTACTGGGGGCACCTATCAAGTGATAAGCATAAACCCAGAAACACAAAAGTTTTTGATCCACATAAAAAATGTAGTTAACTGTGATGGTCAAAACTCAATGAACAAGCTTCTACTTCTCAACCAGTCATCTCCATTTCATCTTACTGGCAATTGCCATGCTGATCCAACCACCTTTAGTTCTAATGCTCCCCTGAAACATGGAGTAGAAATAGAATTAAGTTGGGAGATTCCATTAGAGCCGATTTGTTCATCATTGTTGGACTGCATGGACTGGCCAAATTCAACTTGCAATGCTACCACTAATGGGAAGAAGAGATGCCTTTGCAATGCAAACTTTCTTTGGGATGGCTTCGAATTAAGTTGTGTTTTAGAAGGCAATAATAGCTACAAAACAGAAAGGCATATGTCATTACATAATATCCTTGTAGTCACTTTTACAACTGTGGTTGTCTTAATTCTTCTCTCAAGTACTGCTATATGTATTCACTTGCAGCAAAAGAGACAGGCCAAAACACAGGGTAACTTAAACTCTGGGATGAACTTGTATGGCAGTGAGAGATATGTCAGAGACTTTATTGAATCTGGTAGGTTGAAAGAAGATGATGCACAGGCCATAGATATTCCACATTTTCATTTGGAAACCATACTTGAAGCAACTAATGACTTTGCAAATGCAAACAAGCTTGGACAAGGGGGTTTTGGTCCAGTCTACAAGGGTAAGTTTCCTGGAGGACAAGAAATAGCAGTAAAGAGACTTTCAAGTTGTTCTGGACAAGGTTTAGAAGAGTTCAAAAATGAAGTTGTGTTGATTGCCAAGCTTCAACATCGAAACTTGGTTAGACTTCTGGGTTACTGTGTGGAAGGAGATGAAAAGATGCTAGTATATGAATATATGCCAAACAGAAGCTTGGATGCTTTCATTTTTGACCGGAAGCAGTGTGTTCTATTAGATTGGGATATGCGGTTCAAGATTATTTTGGGGATTGCTCGAGGGCTCCTTTACCTACATGAAGATTCTAGGTTGAGGATTATTCATAGAGACATGAAAACAAGTAATATTCTACTAGATGAAGAGAAGAATCCAAAAATCTCAGACTTTGGCTTAGCAAGGATATTTGGAGGAAAAGAGACAGTAGGGAACACAGACAGAGTGGTTGGAACTTATGGATACATGTCTCCGGAGTATGCACTTGATGGACATTTTTCAGTCAAGTCAGATGTATTTAGCTTTGGTGTGGTGGTACTTGAGATTATTAGTGGAAAAAGGAACACTGGATTTTATCAAGCAGAAAATGAATTGAGTCTTCTAGGATATGCATGGCATTTGTGGAAAGTAGGCAAGGCATTTGACTTCATGGACAGGACACTATATGAAACATGCAAAGCAGATGAATGCTTGAAATGTGTGAATGTGGGTCTTTTATGCTTACAAGAAGATCCAAATGAACGTCCCAACATGTCAAATGTGGTTTTCATGCTTGGCAGTGAATCTAATACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTATCAGGAGATGCCCTTCAAGCAGAGCGTCTAGCTCAAGTAAAGTGGAAACTTTTTCACGTAATGAATTGACAGTCACTTTAGAAAATGGCAGGTAG 2694 0.3983 MEAPIAEDGNLRVLDKSGKSYWGTSVERSSSQNRTVKLMDNGNLILRMKMDESLALTSWRSYEDPTPGNFSFEQDQGENQYIIWKRSMRYWKSSVLGKFVGTGEMSSAISYLLSNFTLRISPNNTVPFLTSSLYSDTRLVMTYWGQLQYKKMDTEKKWLLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGFKPNSQESWNAGDFSGGCSRKTNVCSEDANSDTFLSLKMMKVGNPDAQFNAKNEEECKSECLNNCQCCAYSYEDTEKTRQGNVGDAVCWIWSEDLNNLEEEYDDGCDLNVRVAFSDIESSRSSCGTCGTNFIPYPLSTRPNCGDPIYSSFHCNISTGELDFETTGGTYQVISINPETQKFLIHIKNVVNCDGQNSMNKLLLLNQSSPFHLTGNCHADPTTFSSNAPLKHGVEIELSWEIPLEPICSSLLDCMDWPNSTCNATTNGKKRCLCNANFLWDGFELSCVLEGNNSYKTERHMSLHNILVVTFTTVVVLILLSSTAICIHLQQKRQAKTQGNLNSGMNLYGSERYVRDFIESGRLKEDDAQAIDIPHFHLETILEATNDFANANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDAFIFDRKQCVLLDWDMRFKIILGIARGLLYLHEDSRLRIIHRDMKTSNILLDEEKNPKISDFGLARIFGGKETVGNTDRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQAENELSLLGYAWHLWKVGKAFDFMDRTLYETCKADECLKCVNVGLLCLQEDPNERPNMSNVVFMLGSESNTLPSPKEPAFVIRRCPSSRASSSSKVETFSRNELTVTLENGR 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1737g00005 897 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 90 876 - -
Gabi1737g00005 897 ProSiteProfiles EGF-like domain profile. 165 201 IPR000742 -
Gabi1737g00005 897 Pfam Protein tyrosine and serine/threonine kinase 582 848 IPR001245 GO:0004672|GO:0006468
Gabi1737g00005 897 SUPERFAMILY alpha-D-mannose-specific plant lectins 5 94 IPR036426 -
Gabi1737g00005 897 PIRSF SRK 1 326 IPR024171 GO:0004674
Gabi1737g00005 897 PIRSF SRK 439 897 IPR024171 GO:0004674
Gabi1737g00005 897 CDD STKc_IRAK 585 850 - -
Gabi1737g00005 897 Gene3D Transferase(Phosphotransferase) domain 1 655 860 - -
Gabi1737g00005 897 Pfam PAN-like domain 222 291 IPR003609 -
Gabi1737g00005 897 SMART ntp_6 223 306 IPR003609 -
Gabi1737g00005 897 CDD PAN_AP_plant 219 307 - -
Gabi1737g00005 897 Gene3D Phosphorylase Kinase; domain 1 545 654 - -
Gabi1737g00005 897 ProSiteProfiles Bulb-type lectin domain profile. 1 59 IPR001480 -
Gabi1737g00005 897 Gene3D - 2 94 IPR036426 -
Gabi1737g00005 897 ProSiteProfiles Protein kinase domain profile. 579 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1737g00005 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Gabi1737g00005 897 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 655 858 - -
Gabi1737g00005 897 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 544 654 - -
Gabi1737g00005 897 ProSiteProfiles PAN/Apple domain profile. 219 307 IPR003609 -
Gabi1737g00005 897 SMART serkin_6 579 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1737g00005 897 SUPERFAMILY Protein kinase-like (PK-like) 563 880 IPR011009 -
Gabi1737g00005 897 Pfam S-locus glycoprotein domain 98 198 IPR000858 GO:0048544
Gabi1737g00005 897 Pfam D-mannose binding lectin 5 66 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1737g00005 Gabi-Chr1737 41238 46335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1737g00005 557 868 Receptor kinase-like Gene Family AT4G23140 57.233 2.83e-125 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1737g00005 PK_Tyr_Ser-Thr 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1737g00005 - - gmx:100775297 1537.32