Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1737g00004 ATGGAAGCTCCCATTGCAGAAGATGGGAATCTCAGGGTTTTGGACAAGAGTGGGAAATCATACTGGGGCACTAGTGTTGAAAGATCATCTTCACAGAACAGGACAGTGAAGCTAATGGACAACGGGAACCTTATTTTAAGTGAAGAAGAAGGACATGCTGTGAAGATTCTGTGGCAGAGTTTTGCTAATCCAACAGATACATTTCTTCCAGGGATGAAAATGGATGAGAGTTTAGCATTAACTTCATGGAGAAGTTATGAAGACCCAACACCAGGGAACTTCTCTTTTGAGCAAGATCAGGGAGAGAACCAGTATATCATATGGAAGAGATCAATGAGATATTGGAAAAGCAGTGTATTAGGTAAATTTGTTGGAACTGGTGAGATGTCTTCAGCAATATCTTACTTGTTGTCAAATTTCACCTTGAGAATATCCCCAAACAACACTGTTCCCTTTCTCACTTCATCTCTATATAGTGACACAAGGTTGGTAATGACTTACTGGGGTCAACTTCAGTATAAGAAGATGGATACAGAGAAAAAATGGTTGTTAGTTTGGGTAGAGCCTAGAGATAGATGCAGTGTGTTTAATGCATGTGGAAACTTTGGTAGCTGTAATAGCAAGTATGATTCTATGTGCAAGTGTTTGCCTGGGTTTAAGCCTAATTCCCAAGAGAGTTGGAATGCTGGAGATTTTTCAGGTGGATGTAGCAGGAAAACAAATGTATGTAGTGAGGATGCCAACAGTGACACGTTTTTGAGCTTAAAAATGATGAAAGTAGGGAACCCGGATGCTCAATTTAATGCTAAGAATGAAGAGGAATGCAAGTCAGAGTGCCTCAACAATTGCCAGTGCTGTGCTTATTCATATGAAGACACTGAAAAGACAAGGCAGGGGAATGTTGGTGATGCTGTTTGCTGGATTTGGTCTGAGGATTTGAACAATCTAGAAGAAGAGTATGATGATGGTTGTGACCTGAATGTTCGCGTGGCATTTTCTGATATAGAATCCAGTAGGAGCAGTTGTGGGACTTGTGGCACAAACTTCATTCCATATCCTCTTAGCACAAGACCAAATTGTGGTGACCCCATATACTCCAGTTTTCACTGCAACATTTCCACTGGTGAGCTTGACTTTGAGACTACTGGGGGCACCTATCAAGTGATAAGCATAAACCCAGAAACACAAAAGTTTTTGATCCACATAAAAAATGTAGTTAACTGTGATGGTCAAAACTCAATGAACAAGCTTCTACTTCTCAACCAGTCATCTCCATTTCATCTTACTGGCAATTGCCATGCTGATCCAACCACCTTTAGTTCTAATGCTCCCCTGAAACATGGAGTAGAAATAGAATTAAGTTGGGAGATTCCATTAGAGCCGATTTGTTCATCATTGTTGGACTGCATGGACTGGCCAAATTCAACTTGCAATGCTACCACTAATGGGAAGAAGAGATGCCTTTGCAATGCAAACTTTCTTTGGGATGGCTTCGAATTAAGTTGTGTTTTAGAAGGCAATAATAGCTACAAAACAGAAAGGCATATGTCATTACATAATATCCTTGTAGTCACTTTTACAACTGTGGTTGTCTTAATTCTTCTCTCAAGTACTGCTATATGTATTCACTTGCAGCAAAAGAGACAGGCCAAAACACAGGGTAACTTAAACTCTGGGATGAACTTGTATGGCAGTGAGAGATATGTCAGAGACTTTATTGAATCTGGTAGGTTGAAAGAAGATGATGCACAGGCCATAGATATTCCACATTTTCATTTGGAAACCATACTTGAAGCAACTAATGACTTTGCAAATGCAAACAAGCTTGGACAAGGGGGTTTTGGTCCAGTCTACAAGGGTAAGTTTCCTGGAGGACAAGAAATAGCAGTAAAGAGACTTTCAAGTTGTTCTGGACAAGGTTTAGAAGAGTTCAAAAATGAAGTTGTGTTGATTGCCAAGCTTCAACATCGAAACTTGGTTAGACTTCTGGGTTACTGTGTGGAAGGAGATGAAAAGATGCTAGTATATGAATATATGCCAAACAGAAGCTTGGATGCTTTCATTTTTGACCGGAAGCAGTGTGTTCTATTAGATTGGGATATGCGGTTCAAGATTATTTTGGGGATTGCTCGAGGGCTCCTTTACCTACATGAAGATTCTAGGTTGAGGATTATTCATAGAGACATGAAAACAAGTAATATTCTACTAGATGAAGAGAAGAATCCAAAAATCTCAGACTTTGGCTTAGCAAGGATATTTGGAGGAAAAGAGACAGTAGGGAACACAGACAGAGTGGTTGGAACTTATGGATACATGTCTCCGGAGTATGCACTTGATGGACATTTTTCAGTCAAGTCAGATGTATTTAGCTTTGGTGTGGTGGTACTTGAGATTATTAGTGGAAAAAGGAACACTGGATTTTATCAAGCAGAAAATGAATTGAGTCTTCTAGGATATGCATGGCATTTGTGGAAAGTAGGCAAGGCATTTGACTTCATGGACAGGACACTATATGAAACATGCAAAGCAGATGAATGCTTGAAATGTGTGAATGTGGGTCTTTTATGCTTACAAGAAGATCCAAATGAACGTCCCAACATGTCAAATGTGGTTTTCATGCTTGGCAGTGAATCTAATACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTATCAGGAGATGCCCTTCAAGCAGAGCGTCTAGCTCAAGTAAAGTGGAAACTTTTTCACGTAATGAATTGACAGTCACTTTAGAAAATGGCAGGTAG 2766 0.3988 MEAPIAEDGNLRVLDKSGKSYWGTSVERSSSQNRTVKLMDNGNLILSEEEGHAVKILWQSFANPTDTFLPGMKMDESLALTSWRSYEDPTPGNFSFEQDQGENQYIIWKRSMRYWKSSVLGKFVGTGEMSSAISYLLSNFTLRISPNNTVPFLTSSLYSDTRLVMTYWGQLQYKKMDTEKKWLLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGFKPNSQESWNAGDFSGGCSRKTNVCSEDANSDTFLSLKMMKVGNPDAQFNAKNEEECKSECLNNCQCCAYSYEDTEKTRQGNVGDAVCWIWSEDLNNLEEEYDDGCDLNVRVAFSDIESSRSSCGTCGTNFIPYPLSTRPNCGDPIYSSFHCNISTGELDFETTGGTYQVISINPETQKFLIHIKNVVNCDGQNSMNKLLLLNQSSPFHLTGNCHADPTTFSSNAPLKHGVEIELSWEIPLEPICSSLLDCMDWPNSTCNATTNGKKRCLCNANFLWDGFELSCVLEGNNSYKTERHMSLHNILVVTFTTVVVLILLSSTAICIHLQQKRQAKTQGNLNSGMNLYGSERYVRDFIESGRLKEDDAQAIDIPHFHLETILEATNDFANANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDAFIFDRKQCVLLDWDMRFKIILGIARGLLYLHEDSRLRIIHRDMKTSNILLDEEKNPKISDFGLARIFGGKETVGNTDRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQAENELSLLGYAWHLWKVGKAFDFMDRTLYETCKADECLKCVNVGLLCLQEDPNERPNMSNVVFMLGSESNTLPSPKEPAFVIRRCPSSRASSSSKVETFSRNELTVTLENGR 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1737g00004 921 ProSiteProfiles PAN/Apple domain profile. 243 331 IPR003609 -
Gabi1737g00004 921 Gene3D Phosphorylase Kinase; domain 1 569 678 - -
Gabi1737g00004 921 Pfam PAN-like domain 246 315 IPR003609 -
Gabi1737g00004 921 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 679 882 - -
Gabi1737g00004 921 Pfam Protein tyrosine and serine/threonine kinase 606 872 IPR001245 GO:0004672|GO:0006468
Gabi1737g00004 921 Gene3D Transferase(Phosphotransferase) domain 1 679 884 - -
Gabi1737g00004 921 Gene3D - 2 62 IPR036426 -
Gabi1737g00004 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 724 736 IPR008271 GO:0004672|GO:0006468
Gabi1737g00004 921 ProSiteProfiles EGF-like domain profile. 189 225 IPR000742 -
Gabi1737g00004 921 SUPERFAMILY Protein kinase-like (PK-like) 587 904 IPR011009 -
Gabi1737g00004 921 Pfam S-locus glycoprotein domain 122 222 IPR000858 GO:0048544
Gabi1737g00004 921 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 58 900 - -
Gabi1737g00004 921 PIRSF SRK 2 351 IPR024171 GO:0004674
Gabi1737g00004 921 PIRSF SRK 463 921 IPR024171 GO:0004674
Gabi1737g00004 921 SUPERFAMILY alpha-D-mannose-specific plant lectins 5 88 IPR036426 -
Gabi1737g00004 921 SMART serkin_6 603 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1737g00004 921 Pfam D-mannose binding lectin 5 77 IPR001480 -
Gabi1737g00004 921 ProSiteProfiles Bulb-type lectin domain profile. 1 59 IPR001480 -
Gabi1737g00004 921 CDD STKc_IRAK 609 874 - -
Gabi1737g00004 921 SMART ntp_6 247 330 IPR003609 -
Gabi1737g00004 921 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 568 678 - -
Gabi1737g00004 921 CDD PAN_AP_plant 243 331 - -
Gabi1737g00004 921 ProSiteProfiles Protein kinase domain profile. 603 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1737g00004 Gabi-Chr1737 41238 46335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1737g00004 581 892 Receptor kinase-like Gene Family AT4G23140 57.233 4.75e-125 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1737g00004 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1737g00004 - - gmx:100775297 1591.25