Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1737g00003 ATGGACAACGGGAACCTTATTTTAAGTGAAGAAGAAGGACATGCTGTGAAGATTCTGTGGCAGAGTTTTGCTAATCCAACAGATACATTTCTTCCAGGGATGAAAATGGATGAGAGTTTAGCATTAACTTCATGGAGAAGTTATGAAGACCCAACACCAGGGAACTTCTCTTTTGAGCAAGATCAGGGAGAGAACCAGTATATCATATGGAAGAGATCAATGAGATATTGGAAAAGCAGTGTATTAGGTAAATTTGTTGGAACTGGTGAGATGTCTTCAGCAATATCTTACTTGTTGTCAAATTTCACCTTGAGAATATCCCCAAACAACACTGTTCCCTTTCTCACTTCATCTCTATATAGTGACACAAGGTTGGTAATGACTTACTGGGGTCAACTTCAGTATAAGAAGATGGATACAGAGAAAAAATGGTTGTTAGTTTGGGTAGAGCCTAGAGATAGATGCAGTGTGTTTAATGCATGTGGAAACTTTGGTAGCTGTAATAGCAAGTATGATTCTATGTGCAAGTGTTTGCCTGGGTTTAAGCCTAATTCCCAAGAGAGTTGGAATGCTGGAGATTTTTCAGGTGGATGTAGCAGGAAAACAAATGTATGTAGTGAGGATGCCAACAGTGACACGTTTTTGAGCTTAAAAATGATGAAAGTAGGGAACCCGGATGCTCAATTTAATGCTAAGAATGAAGAGGAATGCAAGTCAGAGTGCCTCAACAATTGCCAGTGCTGTGCTTATTCATATGAAGACACTGAAAAGACAAGGCAGGGGAATGTTGGTGATGCTGTTTGCTGGATTTGGTCTGAGGATTTGAACAATCTAGAAGAAGAGTATGATGATGGTTGTGACCTGAATGTTCGCGTGGCATTTTCTGATATAGAATCCAGTAGGAGCAGTTGTGGGACTTGTGGCACAAACTTCATTCCATATCCTCTTAGCACAAGACCAAATTGTGGTGACCCCATATACTCCAGTTTTCACTGCAACATTTCCACTGGTGAGCTTGACTTTGAGACTACTGGGGGCACCTATCAAGTGATAAGCATAAACCCAGAAACACAAAAGTTTTTGATCCACATAAAAAATGTAGTTAACTGTGATGGTCAAAACTCAATGAACAAGCTTCTACTTCTCAACCAGTCATCTCCATTTCATCTTACTGGCAATTGCCATGCTGATCCAACCACCTTTAGTTCTAATGCTCCCCTGAAACATGGAGTAGAAATAGAATTAAGTTGGGAGATTCCATTAGAGCCGATTTGTTCATCATTGTTGGACTGCATGGACTGGCCAAATTCAACTTGCAATGCTACCACTAATGGGAAGAAGAGATGCCTTTGCAATGCAAACTTTCTTTGGGATGGCTTCGAATTAAGTTGTGTTTTAGAAGGCAATAATAGCTACAAAACAGAAAGGCATATGTCATTACATAATATCCTTGTAGTCACTTTTACAACTGTGGTTGTCTTAATTCTTCTCTCAAGTACTGCTATATGTATTCACTTGCAGCAAAAGAGACAGGCCAAAACACAGGGTAACTTAAACTCTGGGATGAACTTGTATGGCAGTGAGAGATATGTCAGAGACTTTATTGAATCTGGTAGGTTGAAAGAAGATGATGCACAGGCCATAGATATTCCACATTTTCATTTGGAAACCATACTTGAAGCAACTAATGACTTTGCAAATGCAAACAAGCTTGGACAAGGGGGTTTTGGTCCAGTCTACAAGGGTAAGTTTCCTGGAGGACAAGAAATAGCAGTAAAGAGACTTTCAAGTTGTTCTGGACAAGGTTTAGAAGAGTTCAAAAATGAAGTTGTGTTGATTGCCAAGCTTCAACATCGAAACTTGGTTAGACTTCTGGGTTACTGTGTGGAAGGAGATGAAAAGATGCTAGTATATGAATATATGCCAAACAGAAGCTTGGATGCTTTCATTTTTGACCGGAAGCAGTGTGTTCTATTAGATTGGGATATGCGGTTCAAGATTATTTTGGGGATTGCTCGAGGGCTCCTTTACCTACATGAAGATTCTAGGTTGAGGATTATTCATAGAGACATGAAAACAAGTAATATTCTACTAGATGAAGAGAAGAATCCAAAAATCTCAGACTTTGGCTTAGCAAGGATATTTGGAGGAAAAGAGACAGTAGGGAACACAGACAGAGTGGTTGGAACTTATGGATACATGTCTCCGGAGTATGCACTTGATGGACATTTTTCAGTCAAGTCAGATGTATTTAGCTTTGGTGTGGTGGTACTTGAGATTATTAGTGGAAAAAGGAACACTGGATTTTATCAAGCAGAAAATGAATTGAGTCTTCTAGGATATGCATGGCATTTGTGGAAAGTAGGCAAGGCATTTGACTTCATGGACAGGACACTATATGAAACATGCAAAGCAGATGAATGCTTGAAATGTGTGAATGTGGGTCTTTTATGCTTACAAGAAGATCCAAATGAACGTCCCAACATGTCAAATGTGGTTTTCATGCTTGGCAGTGAATCTAATACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTATCAGGAGATGCCCTTCAAGCAGAGCGTCTAGCTCAAGTAAAGTGGAAACTTTTTCACGTAATGAATTGACAGTCACTTTAGAAAATGGCAGGTAG 2652 0.3963 MDNGNLILSEEEGHAVKILWQSFANPTDTFLPGMKMDESLALTSWRSYEDPTPGNFSFEQDQGENQYIIWKRSMRYWKSSVLGKFVGTGEMSSAISYLLSNFTLRISPNNTVPFLTSSLYSDTRLVMTYWGQLQYKKMDTEKKWLLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGFKPNSQESWNAGDFSGGCSRKTNVCSEDANSDTFLSLKMMKVGNPDAQFNAKNEEECKSECLNNCQCCAYSYEDTEKTRQGNVGDAVCWIWSEDLNNLEEEYDDGCDLNVRVAFSDIESSRSSCGTCGTNFIPYPLSTRPNCGDPIYSSFHCNISTGELDFETTGGTYQVISINPETQKFLIHIKNVVNCDGQNSMNKLLLLNQSSPFHLTGNCHADPTTFSSNAPLKHGVEIELSWEIPLEPICSSLLDCMDWPNSTCNATTNGKKRCLCNANFLWDGFELSCVLEGNNSYKTERHMSLHNILVVTFTTVVVLILLSSTAICIHLQQKRQAKTQGNLNSGMNLYGSERYVRDFIESGRLKEDDAQAIDIPHFHLETILEATNDFANANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDAFIFDRKQCVLLDWDMRFKIILGIARGLLYLHEDSRLRIIHRDMKTSNILLDEEKNPKISDFGLARIFGGKETVGNTDRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQAENELSLLGYAWHLWKVGKAFDFMDRTLYETCKADECLKCVNVGLLCLQEDPNERPNMSNVVFMLGSESNTLPSPKEPAFVIRRCPSSRASSSSKVETFSRNELTVTLENGR 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1737g00003 883 CDD PAN_AP_plant 205 293 - -
Gabi1737g00003 883 ProSiteProfiles PAN/Apple domain profile. 205 293 IPR003609 -
Gabi1737g00003 883 Gene3D Transferase(Phosphotransferase) domain 1 641 846 - -
Gabi1737g00003 883 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 50 IPR036426 -
Gabi1737g00003 883 Pfam Protein tyrosine and serine/threonine kinase 568 834 IPR001245 GO:0004672|GO:0006468
Gabi1737g00003 883 ProSiteProfiles EGF-like domain profile. 151 187 IPR000742 -
Gabi1737g00003 883 Gene3D Phosphorylase Kinase; domain 1 531 640 - -
Gabi1737g00003 883 Pfam D-mannose binding lectin 1 39 IPR001480 -
Gabi1737g00003 883 ProSiteProfiles Protein kinase domain profile. 565 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1737g00003 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672|GO:0006468
Gabi1737g00003 883 SMART ntp_6 209 292 IPR003609 -
Gabi1737g00003 883 CDD STKc_IRAK 571 836 - -
Gabi1737g00003 883 PIRSF SRK 1 313 IPR024171 GO:0004674
Gabi1737g00003 883 PIRSF SRK 425 883 IPR024171 GO:0004674
Gabi1737g00003 883 Pfam S-locus glycoprotein domain 84 184 IPR000858 GO:0048544
Gabi1737g00003 883 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 641 844 - -
Gabi1737g00003 883 Pfam PAN-like domain 208 277 IPR003609 -
Gabi1737g00003 883 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 530 640 - -
Gabi1737g00003 883 SUPERFAMILY Protein kinase-like (PK-like) 549 866 IPR011009 -
Gabi1737g00003 883 SMART serkin_6 565 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1737g00003 883 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1737g00003 Gabi-Chr1737 41177 46335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1737g00003 543 854 Receptor kinase-like Gene Family AT4G23140 57.233 2.93e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1737g00003 PK_Tyr_Ser-Thr 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1737g00003 - - gmx:100775297 1542.32