Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1726g00092 ATGACCAACAAAACCAAGGTGGAACTTGCATGGAAACTTGGCCTTATTTTCATGCTAAGTGTTCAACATACTTCAGCACACCAAAATCTAGAATTCGGAGAAGCAAAGGAGAAACTCGAAGATCAGAGAAGCTTATTAACTTACATTGTTCACGTTAAAAAGCCTCAGGATGGATTATTTTCTCTTGAATCTGAGGATTTGCATAGCTGGTACCATTCACTTCTGCCAACAGATGGTACAAAAAGTCTGAACAAGCAGCGCATTATTTTCTCATACAAAAATGTGATTGATGGATTCGCAGTGAAATTAACCCCAAAAGAAGCTAAAGCTCTGGAAGACAAGGAGGAGATTGTGTCAGCCCGGCCTGAAAAGATACTCTCTTTACATACAACTCACACTCCAAGCTTCTTGGGGTTGCAACAGGGACAAGGATTATGGAAAGATTCCAACCGTGGCAAAGGGATCATAATTGGAATTGTGGACACTGGGATATCCCCAGCACATCCTTCCTTTTCCGATGAAGGAATGCCATTTCCACCAGCAAAATGGAATGGCCACTGTGAATTCACTGGGCAGAAGACTTGCAATAACAAGCTCCTCGGCGCAAGGAATTTTCTCCAACACTCAAGGAATTCAACCCTTCCATTTGATGATGTTGGTCATGGAACTCACACAGCCGCCACAGCCGCTGGAAGATTCGTACAAGGTGCTAATATCTTTGGCAATGCTAACGGTACTGCAGCTGGCATGGCACCCGATGCACACTTGGCAGTTTACAAGGTTTGCAACATTAAGGGTTGTCCTGAAAGTGCAATATTAGCTGGAATGGACACTGCCATTGAAGATGGTGTGGATGTTCTTTCTCTGTCCCTTGGTGGATCCTCTCTACCTTTTTTTGAAGATATTATTGCATTGGGTGCTTTTGGTGCAATTCAGAAGGGAATTTTCGTTAGTTGTTCAGCCGGTAACGGAGGTCCTGATTATAACACATTGTCCAATGAGGCTCCATGGATTCTCACCGTTGGTGCAAGCTCCACTGACAGAAAAATATTAGCAACAGCGAGACTTGGGGATGGGGAAGAATATGATGGTGAATCAGTGTTCCAACCCAAAGACTTTGCACCCACGTTATTGCCTCTTGTTGATGCAGGTGCAATTGGGAATGGTTCCTCTGCCTTATGTGCACCTGGATCCTTACGAAACTCGGATGTTAAGGGAAAGGTAGTGCTTTGCGAGCAAGGTGGACTCATTGCAAGAATAGCCAAAGGGAAAGAAGTTAAGAATGCTGGTGGTGTGGCCATGATTCTCATGAGCAGTGAAATTGAAGACTTTAATACCTTTGCTGATGTTCATGTCCTTCCTGCTGTACACGTAAGTCACAGTGCTGGATTAGCCATCAAAGGTTATATAAATTCAACTCTAACACCAACAGCCACAATCTTATTCAAAGGAACTGTTATTGGAGACCCACTTGCACCTGTGGTTGCTTCCTTTTCTTCTAGAGGTCCAAGCAGAGCAAGCCCAGGAATTCTGAAACCGGACATAATTGGACCGGGATTGAACATTCTAGCTGCATGGCCTGTATCTTTGGACAACAATGAACCACCATTCAACATGATTTCAGGTACCTCAATGTCTTGTCCTCATCTAAGTGGCATTGCTGCTTTGTTGAAAAACTCTCATCCAGATTGGTCCCCTGCTGCTATAAAGTCAGCAATCATGACAAGTGCTGATGTTGTAAACCTTGGAGGGAAACCTATATTGGACCAAAGGCTTCTACCAGCTGATGTATTTGCTACTGGTGCTGGACATGTTAACCCTTCCAAAGCAAACGATCCAGGCCTTGTTTATGATATCCAACCAGATGATTACATTCCTTATTTATGTGGTTTGGGTTACACTGACAGACAAGTTTCTCTTATTTTGCAACAGAAAGTGAAATGCTCTGAGGTAAAAAGCATAACGGAAGCACAGCTCAATTATCCTTCATTTTCTATTCAATTGGGGAACACTTCACAGTTCTACACCAGAACGCTGACAAATGTTGGACCCGCCAACTCAACTTACTCTCTGGAAATTGACGTGCCTTTGGCAGTAGGTATGAGTGTAAGCTCTGATCAGATAACATTCACAGAGGTGAACCAGAAGTTTACATACTCGGTTGGGTTTTCTCCTGAAGACAAAGAGAATAGAGGCAATCACACGTTTGCTCAGGGGTCTCTCAAGTGGGTGTCAGAAAAATACTCTGTTAGCATCCCTATATCTATCATCTTCCGGTGA 2280 0.4351 MTNKTKVELAWKLGLIFMLSVQHTSAHQNLEFGEAKEKLEDQRSLLTYIVHVKKPQDGLFSLESEDLHSWYHSLLPTDGTKSLNKQRIIFSYKNVIDGFAVKLTPKEAKALEDKEEIVSARPEKILSLHTTHTPSFLGLQQGQGLWKDSNRGKGIIIGIVDTGISPAHPSFSDEGMPFPPAKWNGHCEFTGQKTCNNKLLGARNFLQHSRNSTLPFDDVGHGTHTAATAAGRFVQGANIFGNANGTAAGMAPDAHLAVYKVCNIKGCPESAILAGMDTAIEDGVDVLSLSLGGSSLPFFEDIIALGAFGAIQKGIFVSCSAGNGGPDYNTLSNEAPWILTVGASSTDRKILATARLGDGEEYDGESVFQPKDFAPTLLPLVDAGAIGNGSSALCAPGSLRNSDVKGKVVLCEQGGLIARIAKGKEVKNAGGVAMILMSSEIEDFNTFADVHVLPAVHVSHSAGLAIKGYINSTLTPTATILFKGTVIGDPLAPVVASFSSRGPSRASPGILKPDIIGPGLNILAAWPVSLDNNEPPFNMISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTSADVVNLGGKPILDQRLLPADVFATGAGHVNPSKANDPGLVYDIQPDDYIPYLCGLGYTDRQVSLILQQKVKCSEVKSITEAQLNYPSFSIQLGNTSQFYTRTLTNVGPANSTYSLEIDVPLAVGMSVSSDQITFTEVNQKFTYSVGFSPEDKENRGNHTFAQGSLKWVSEKYSVSIPISIIFR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1726g00092 759 Pfam Subtilase family 152 580 IPR000209 GO:0006508|GO:0008236
Gabi1726g00092 759 Gene3D - 628 757 - -
Gabi1726g00092 759 ProSiteProfiles Serine proteases, subtilase domain profile. 136 611 - -
Gabi1726g00092 759 FunFam Subtilisin-like protease SBT1.5 154 377 - -
Gabi1726g00092 759 FunFam subtilisin-like protease SBT1.5 347 487 - -
Gabi1726g00092 759 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 157 168 IPR023827 -
Gabi1726g00092 759 PRINTS Subtilisin serine protease family (S8) signature 152 171 IPR015500 -
Gabi1726g00092 759 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Gabi1726g00092 759 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Gabi1726g00092 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 129 IPR037045 -
Gabi1726g00092 759 Pfam Fibronectin type-III domain 658 756 IPR041469 -
Gabi1726g00092 759 Pfam PA domain 379 466 IPR003137 -
Gabi1726g00092 759 CDD Peptidases_S8_3 128 578 IPR034197 -
Gabi1726g00092 759 SUPERFAMILY PA domain 401 500 IPR046450 -
Gabi1726g00092 759 CDD PA_subtilisin_like 353 480 - -
Gabi1726g00092 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 755 IPR045051 -
Gabi1726g00092 759 Gene3D - 347 487 - -
Gabi1726g00092 759 Gene3D Peptidase S8/S53 domain 154 624 IPR036852 GO:0004252|GO:0006508
Gabi1726g00092 759 SUPERFAMILY Subtilisin-like 128 615 IPR036852 GO:0004252|GO:0006508
Gabi1726g00092 759 Pfam Peptidase inhibitor I9 47 129 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1726g00092 Gabi-Chr1726 826373 828652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1726g00092 13 759 Subtilisin-like Serine Gene Family AT1G04110 42.930 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1726g00092 - - gmx:100799902 1125.15