Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1726g00076 ATGGATCCAATTACAGCACACGGACATTCTCTTCCCCCTCCTTTCCACACAGCAAGAGATCTCCATCTGCACCATCATCAGTTCCATGCTTTACAGCAAAACACAGAAGACGAACAAAGCGGAAGCAGCGGTGGCTTAAACCTTGCACCGAAAAGGGAAAGAGAAGAAAACAGCAACAACAATAACAGCAGTGAAGGAAAAGATGGCGGAGGAGGAGGTGGTGGTGGTGGCGGCTCCGGTGAAACTGAAATGACAAGAAGACCTCGAGGAAGACCAGCTGGATCCAAGAACAAACCCAAGCCACCAATTATCATCACGCGCGACAGCGCAAATGCCCTAAAAACCCACGTGATGGAGGTTGCTGACGGTTGTGACATCGTTGAAAGCGTTTCAAACTTCGCTAGGCGTCGCCAAAGAGGGGTTTGTATCATGAGTGGCACTGGAACAGTCTCTAATGTAACTCTCAGGCAACCAGCTTCTTCTGGTGCTGTTGTTACTCTTCATGGAAGGTTCGAGATCTTGTCCCTTGCTGGATCGTTTCTGCCACCGCCAGCTCCGCCAGCTGCTTCGGGTCTGACCATATATTTGGCCGGTGGTCAAGGCCAGGTTGTAGGAGGAAGTGTTGTTGGAACACTTCTTGCTTCAGGACCAGTGGTGATTATGTCTGCTTCATTCAGCAACGCTGCATATGAGAGACTCCCTTTGGAAGAAGAAGATCCTTCCATGGCACTGCAAGGTGGTTCAATTGGGTCTCCTGGTTCTGGTGGACTTGGTCAACAGCAACAACAACAACAGCAGCAGCAACAACAACAACAGACACAGCTTTTAGGGGATGCAACTGCTCCACTTTTTCATGGTTTGCCTCCTAATCTTCTCAATTCTGTTCAGATGCCATCAGAGGCTTTCTGGCCAACTGGTCGTTCTCCATATTGA 933 0.4941 MDPITAHGHSLPPPFHTARDLHLHHHQFHALQQNTEDEQSGSSGGLNLAPKREREENSNNNNSSEGKDGGGGGGGGGGSGETEMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVSNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLLASGPVVIMSASFSNAAYERLPLEEEDPSMALQGGSIGSPGSGGLGQQQQQQQQQQQQQQTQLLGDATAPLFHGLPPNLLNSVQMPSEAFWPTGRSPY 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1726g00076 310 MobiDBLite consensus disorder prediction 252 278 - -
Gabi1726g00076 310 Gene3D - 113 243 - -
Gabi1726g00076 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 43 304 IPR014476 GO:0003680
Gabi1726g00076 310 FunFam AT-hook motif nuclear-localized protein 113 240 - -
Gabi1726g00076 310 ProSiteProfiles PPC domain profile profile. 110 247 IPR005175 -
Gabi1726g00076 310 CDD DUF296 114 181 IPR005175 -
Gabi1726g00076 310 PIRSF ESCAROLA 16 308 IPR014476 GO:0003680
Gabi1726g00076 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 110 239 - -
Gabi1726g00076 310 MobiDBLite consensus disorder prediction 241 310 - -
Gabi1726g00076 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 227 IPR005175 -
Gabi1726g00076 310 MobiDBLite consensus disorder prediction 29 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1726g00076 Gabi-Chr1726 724158 725090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1726g00076 1 310 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 58.430 7.36e-88 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1726g00076 - - gmx:100781436 401.749