Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1726g00072 ATGTGTGAGTTGGTTTATATACGATTTTATGAGGGTTTAACTATGGAGGTTATTAGTGGTAGTGGGGTTACGGCGGTGGGACCGGATGCTCCATCGGAATACCATGCAGCTCCGAGGACTGATAAACCAGCTTCGGCTGGTGGATCGGCCACCACATCGGTTGCTCAAGGGGGTGCTCCGCCACCGCATCCGGCGGGAACAATGATGGCGGCAAAGAAGAAGAGGGGTCGACCTAGAAAGTATGGATCAGACGCGTCGGTGACCATGGCGCTGTCTCCCAAGCCAATATCTTCTTCAGCTCCACTGCCGTCGGTGATCGATTTCTCGGCGGAGAAACTCGGAAAAGTGCGGCCAGCTAGCTCTGTCAGCAATGCCAATTTTGAGTCGGAGAATTTAGGCGAATGGGTTGCGTGCTCGGTCGGTGCTAATTTTACACCCCATATCATCACTGTTAATTCCGGCGAGGATGTTACTATGAAGATAATATCATTTTCTCAGCAAGGACCGCAAACTATATGCATTCTTTCTGCAAATGGTGTCATATCAAGTGTCACCCTTCGTCAGCCTGAATCTTCTGGAGGCACGTTGACATATGAGGGACGGTTTGAAATTCTATCTTTATCTGGTTCATTCATGCCAAATGAAAGTGGTGGAACACGGACCAGATCTGGTGGCATGAGTGTTTCTTTAGCAAGTCCAGATGGACGTGTTGTAGGAGGTGGAGTAGCTGGTCTATTGGTGGCTGCAAGTCCTGTGCAGGTAGTGGTAGGCAGTTTTCTGGCAGGTAACCAACATGAACAGAAGAAAAAAAAACCCAAACATGAGGTAATATCAATAGCAACACCTAACACAACACCAACTGTAGCTGATCCAATACCTAATCTCTCATCTTCTTCTTCCTTCCGCGTAGATAATCTGTCTGCGCAAGCAGTGGCAGCGGATGTCAGGAATAACCCAACTGACATTAATGTGTCACTTCCTGGAGGTAAATTCATAGGGCTTCACTCTCCAAAAATTTTTTTGTAA 1026 0.4756 MCELVYIRFYEGLTMEVISGSGVTAVGPDAPSEYHAAPRTDKPASAGGSATTSVAQGGAPPPHPAGTMMAAKKKRGRPRKYGSDASVTMALSPKPISSSAPLPSVIDFSAEKLGKVRPASSVSNANFESENLGEWVACSVGANFTPHIITVNSGEDVTMKIISFSQQGPQTICILSANGVISSVTLRQPESSGGTLTYEGRFEILSLSGSFMPNESGGTRTRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKKKKPKHEVISIATPNTXTPTVADPIPNLSSSSSFRVDNLSAQAVAADVRNNPTDINVSLPGGKFIGLHSPKIFL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1726g00072 342 FunFam AT-hook motif nuclear-localized protein 1-like 146 276 - -
Gabi1726g00072 342 MobiDBLite consensus disorder prediction 26 85 - -
Gabi1726g00072 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 146 259 IPR005175 -
Gabi1726g00072 342 Gene3D - 146 282 - -
Gabi1726g00072 342 CDD DUF296 145 236 IPR005175 -
Gabi1726g00072 342 ProSiteProfiles PPC domain profile profile. 141 283 IPR005175 -
Gabi1726g00072 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 143 265 - -
Gabi1726g00072 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 46 298 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1726g00072 Gabi-Chr1726 631760 641383 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1726g00072 22 327 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 59.130 3.24e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1726g00072 - - gmx:100801730 413.69