Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1726g00038 ATGGACTTGAAGTCTTCTCATGTTTCTTCTGTTCTCACCGATCCTGTACCTGTAAACAAGTCAAGACTCGGAATCCATTCTTCTAGTGTGCGAACTTATTCCCAACCAGATTCACCCGGGAAGTTTTCAAGAACGGGTTCACGAAAAGGTGCAGGGAGTCTTGATGATGTTCGGTCCAATGGTTGGTTGGATGCCATGAAGGCCTCTTCACCTCCGAGGAAGAAGCTACTTAAAGGTTCCAATGCTCATGTTGCTTCAATTGATTATGACATTGAAGACTATCGCTCATTGATGCTTGATTATCCTTCAGCAATAGACTCTTTTGGGAAAATTATTGACCGTGCAAAGAATAAGAAGATTGCAATGTTTCTAGATTATGATGGCACTCTGTCGCCAATAGTAGATGACCCAGACTGTGCCTTTATGTCTGAAGCTATGCGTGCCACAGTGAAAAGCGTGGCAAGCTATTTTCCCACAGCAATTATCAGTGGAAGATGCCGTGACAAGGTTTTTGATCTAGTTAAACTAACGGAACTCTACTATGCTGGTAGTCATGGAATGGACATTATTGGACCTTTTTGTCAGAGTCCTTCCAATAACTATCCAAATTGCACCAACTCTACTGACCCCAAGGGAAAGGGGATAACTCTCTTTCAACCTGCAAGAGAATTCCTCCCCATGATTGATGAGGTTTTTAGAACCCTTGTCGAGATTACTAAAGATATAAAGGGTGCTAAAATTGAAAATCACAAGTTTTGCGTTTCAGTACATTACCGTAACGTAGAAGAGAATAATTGGACAACAATTGGACAACGTGTCCATGATATACTGAAAAATTACCCTCGTTTACGCTCAACCCATGGACGGAAGGTTTTAGAAGTCCGTCCTGTGATTGACTGGAACAAAGGAAAAGCAGTTGAATTTTTACTTGAATCTTTAGGGTTAAATGATTGGGATGATGTGCTTCCCATTTACATTGGAGATGATAAAACCGATGAAGATGCTTTTAAGGTGCTGAGAGAGAGCAGTCGAGGTTGTGGGATATTGGTTTCGTCAGTGAAGAAAGAAAGCAATGCCTTCTACTCTCTCCGAGACCCGACTGAGGTCATGCAATTTCTCCAACTTCTGGTGAATTGGAAGAGGCAAGAAGAAAGGAAGCATGAGGAGAATTAA 1173 0.4177 MDLKSSHVSSVLTDPVPVNKSRLGIHSSSVRTYSQPDSPGKFSRTGSRKGAGSLDDVRSNGWLDAMKASSPPRKKLLKGSNAHVASIDYDIEDYRSLMLDYPSAIDSFGKIIDRAKNKKIAMFLDYDGTLSPIVDDPDCAFMSEAMRATVKSVASYFPTAIISGRCRDKVFDLVKLTELYYAGSHGMDIIGPFCQSPSNNYPNCTNSTDPKGKGITLFQPAREFLPMIDEVFRTLVEITKDIKGAKIENHKFCVSVHYRNVEENNWTTIGQRVHDILKNYPRLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLNDWDDVLPIYIGDDKTDEDAFKVLRESSRGCGILVSSVKKESNAFYSLRDPTEVMQFLQLLVNWKRQEERKHEEN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1726g00038 390 FunFam Trehalose 6-phosphate phosphatase 227 386 - -
Gabi1726g00038 390 NCBIfam trehalose-phosphatase 225 377 IPR003337 GO:0003824|GO:0005992
Gabi1726g00038 390 MobiDBLite consensus disorder prediction 1 42 - -
Gabi1726g00038 390 Gene3D - 220 390 IPR023214 -
Gabi1726g00038 390 Gene3D - 120 193 IPR023214 -
Gabi1726g00038 390 SUPERFAMILY HAD-like 121 381 IPR036412 -
Gabi1726g00038 390 CDD HAD_TPP 121 370 - -
Gabi1726g00038 390 Pfam Trehalose-phosphatase 123 366 IPR003337 GO:0003824|GO:0005992
Gabi1726g00038 390 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 43 387 IPR044651 GO:0004805|GO:0005992
Gabi1726g00038 390 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1726g00038 Gabi-Chr1726 361823 364157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1726g00038 116 376 Trehalose Biosynthesis Gene Families AT1G70290 26.087 1.63e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1726g00038 K01087 - qsa:O6P43_024315 570.081