Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1725g00001 ATGTCATTTTCCAGTGCCAAAAAATTCTTCCAGAGGTTCTGTGTAGATGAATTCCAAATGGGAAGTTTTCCATATAGCAGCTTTATGTCTAATGATCTCTTGCCATCCCTTGGAGCCAGAATTAACCAGGAAACTAGACTTCGAAAATACATAATCTCCCCTTTCAATCCACGTTATAGGGCATGGGAGATGTTACTGATCATTCTAGTCATTTACTCTGCATGGATTTGCCCCTTTGAATTTGCCTTTCTTCCTTATAAACAAGACACACTATTCATCATAGACAACATAGTCAATGGCTTCTTTGCCGTTGACATCATGCTAACATTCTTTGTTGCATATCTAGATAGCCATTCTTACCTTCTTGTTGATGATCCTAAAAGAATTGCAGTCAGGTACATATCTACATGGTTTATCTTTGATGTATGTTCAACTGCACCATTTCAATCCATCAGCCTCCTCTTCACGAATCATAGCAGTGAGATTGGCTACAAAGCTCTTAACATGCTTCGATTATGGCGCCTGAGACGAGTTAGTTCATTGTTTGCAAGACTTGAGAAGGACATTCGCTTCAATTACTTCTGGACTAGGTGCTCAAAGCTCATAGCTGTAACCTTGTTTGCTGTGCACTGTGCTGGATGCTTTAACTATCTAATTGCAGATAGGTACCCTGATTCCAAAAGGACCTGGATTGGTTCAGCGTACCCAAATTTTAAAGAATTAAGTCTTTGGAACAGATATGTCACATCCATATATTGGTCCATTGTCACACTTACTACCACTGGATATGGAGATTTGCATGCTGAAAACACCAGAGAGATGCTATTTGATATCTTTTACATGTTGTTTAACTTGGGGTTAACATCATACATCATTGGAAACATGACAAACTTGGTAGTTCACTGGACAAGTCACACCAGAAATTTTAGAGATACAATCAGAGCAGCTTCAGAATTTTCAACAAGAAATCATCTGCCTCATCATATACATGATCAAATGTTGTCACACTTGTGTTTGAGGTTCAAAACAGAAGGATTGAACCAGCAAGAAACATTAAATGGTATGCCAAAGGCAATTCGTGCAAGCATTGCATACCATCTATATTTTTCTGTTTTGCAGAAGGTCTACCTCTTCAATGGAATTTCACATGATTTTCTTTTCCAACTGGTTACAGAAATGGAAGCTGAGTATTTCCCACCAAAGGAAGATGTGATACTACAAAACGAGTCTCCTACAGATCTTTATGTGCTGGTTTCAGGGGCAGTGGACCTCATTTGCCATGTTGATGGCCATGATCAAGTTCTGAAGAAGGCAATTGCAGTAGATACATTTGGAGAGATTGGAGTTTTATACAATAGACCACAGCCTTTCACAGTTCGGACCACTGAGCTTTCTCAAATTTTAAGACTCAGCAGAACTTCATTAATGAATGCCATACATGCAAATCCTGAAGAAGCAAAACATATAATGAAAAATCTTTTTATGATGTTAAAGGGACATGAAGGATTGGGTTCTGAACCACCTACAGACCCTGGATTGGTTCTTCATGATGGGGACAACACAAGAGGAAACTCTTCCCATGCATATACAGATAATTCACATGGAGAAGCCAGATTGCGTAACATGATTCCTGAGGATGGAAAAAGAGATCATTATGGTCCTGCACACAAAGGTCATCCAGACATGGTTGAAATTCAGCTAGAAAAAGAAGCAAATGAAAAGAACCATAGTCCCATAAGATGGAAACAGAAAGCTCTTGTAGACCAGAAACAAAACAAGAGCATTTCTGACCTCATAATGAATCTTGAAAATGGGAAGAAATTAGATGAACATATAATAGAGTTAGTGGAGCCAGCAACCCTCAACCATGCTATGACTGACCAATTCAGAAAAACAAGAGAAGATGTTCTTAGAACTACCAACTTCCCTTTAGCAAAAGTGTACACAAACTTCTATTCAAGCAACTCTAACCATCCAAATGATAGAGAAGCAGCAATGTTCATCAATAAGAGAGTTACCATTCACTTTCTTGGCAAACATGGAACTACCTTGCAGGGACAGCATGGGAAGCTGATAATCTTACCTGATTCAATAGAAGAGCTGCTCAAGATTGCTGGAGAAAAGTTTGGAGGCTCCAAGCCTACGAAAGTAATGAATACAGAGAACGCAGAGATAGATGATATCAGTGTCATTCGAGATGGTGATCATCTCTTTTTTCTTTGCAGTGACAGTGACAATTTGAGTTCATAA 2250 0.3889 MSFSSAKKFFQRFCVDEFQMGSFPYSSFMSNDLLPSLGARINQETRLRKYIISPFNPRYRAWEMLLIILVIYSAWICPFEFAFLPYKQDTLFIIDNIVNGFFAVDIMLTFFVAYLDSHSYLLVDDPKRIAVRYISTWFIFDVCSTAPFQSISLLFTNHSSEIGYKALNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCSKLIAVTLFAVHCAGCFNYLIADRYPDSKRTWIGSAYPNFKELSLWNRYVTSIYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSHTRNFRDTIRAASEFSTRNHLPHHIHDQMLSHLCLRFKTEGLNQQETLNGMPKAIRASIAYHLYFSVLQKVYLFNGISHDFLFQLVTEMEAEYFPPKEDVILQNESPTDLYVLVSGAVDLICHVDGHDQVLKKAIAVDTFGEIGVLYNRPQPFTVRTTELSQILRLSRTSLMNAIHANPEEAKHIMKNLFMMLKGHEGLGSEPPTDPGLVLHDGDNTRGNSSHAYTDNSHGEARLRNMIPEDGKRDHYGPAHKGHPDMVEIQLEKEANEKNHSPIRWKQKALVDQKQNKSISDLIMNLENGKKLDEHIIELVEPATLNHAMTDQFRKTREDVLRTTNFPLAKVYTNFYSSNSNHPNDREAAMFINKRVTIHFLGKHGTTLQGQHGKLIILPDSIEELLKIAGEKFGGSKPTKVMNTENAEIDDISVIRDGDHLFFLCSDSDNLSS 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1725g00001 749 FunFam Potassium channel KAT2 365 501 - -
Gabi1725g00001 749 PANTHER POTASSIUM CHANNEL AKT1 26 498 IPR045319 GO:0005249|GO:0006813
Gabi1725g00001 749 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Gabi1725g00001 749 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Gabi1725g00001 749 ProSiteProfiles KHA domain profile. 671 749 IPR021789 -
Gabi1725g00001 749 FunFam Potassium channel KAT3 61 301 - -
Gabi1725g00001 749 Gene3D - 60 300 - -
Gabi1725g00001 749 SMART cnmp_10 377 494 IPR000595 -
Gabi1725g00001 749 CDD CAP_ED 377 490 IPR000595 -
Gabi1725g00001 749 Gene3D Jelly Rolls 344 501 IPR014710 -
Gabi1725g00001 749 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gabi1725g00001 749 SUPERFAMILY cAMP-binding domain-like 304 494 IPR018490 -
Gabi1725g00001 749 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Gabi1725g00001 749 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi1725g00001 749 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi1725g00001 749 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi1725g00001 749 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi1725g00001 749 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi1725g00001 749 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi1725g00001 749 Pfam KHA, dimerisation domain of potassium ion channel 670 739 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1725g00001 Gabi-Chr1725 39788 46472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1725g00001 1 739 Ion Channels AT5G46240 58.895 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1725g00001 K21867 - gmx:100800340 1222.22