Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1718g00009 ATGACTCTAGTTTATGAATTTCTCTTCCTTTTGTTTTGTCACCTTATAATGCTACTTCCCTTGGCGGCTGGGTACCAAGGAGAGTGCCCTCCTTCATTTCAATGTGGATATGTTGGCAATATCAGCTTCCCTTTCACTACAACAGAACGCCAAGACTGTGGCTTATTGGCCATACACAATTGTGATGATCATCCAATGAAGCCAAAAGAGATCCAATTAGTCAATCAAGGGAAATGGTTCGAAGTTATACGCGTTGTTGAACAGGTTCCTCGTAGTCCTACTGTTACAAATTTTCAAGTTAGAGACAAGTATCTGTATCAACTTCTGCAATCCAGAAATTGTGAAGCTTTCACGTACAACTGTACGCTTCCTCCCACCTTCCATTTTGGTGCTTTTCGTATCGGAACTAAAGCAACCCTGTTCAGGTGCAACCAAACCCTCCATGTCAGGCCCCCAACATATATGTATAATTATACAAAGTGCCATGACTACGATCTCTACTACGCGCCAGAAATCACTGCTAATGATGCTTTGACAGCATGTGCAAAGGTCCAGCTTCCAATTAAAGACGTGCCCGACTCTTATGACCCATTTACATTCGTAAACGCAGATATCAACGTTGAAGTAAAATTAACAGATGAATGTGCCAATTGTCACCATTTACAGAGAGGGCAGTGTCAACTCGACAACGGAGGGAGATTTTTTTGTGCCAATGCTACAGCAAAGCCAAAAAGGTTGCGTAGGAATGTCAAACTTTGTATAGGTTTAGGTGTTGGAATCCTAGGCATCTTGATAATTGGGTTGCTGTTGCTTTTTCTACTCTACAAACGAAAACATGCTACCTCAGGTGGACACTTACAATCAGGAAATTCTTATTCTGATTCCTCCTTAAATCCACGCTCAGAAAGTGGTAGTGTATACTTTGGAGTTCCACTCTTCTCCTACGAGAAGCTTAAAGAAGCAACAAACAATTTCGACCATACTAGAGAACTTGGAGATGGAGGCTTTGGTACTGTTTACTATGGGAAACTCCCAGATGGACGGGAAGTAGCTGTCAAACGCTTATATGAGCACAACTACAGGAGAGTACAACAGTTCATAAATGAAGTTGAGATCCTCACACGTTTGCGTCATAAAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTCACAGCCGTGAACTACTGCTTGTGTATGAATATATTTCAAACGGTACCGTTGCTTGCCATCTCCATGGTGGATTAGCCAAGTCTGGCTTACTACCGGGGTCTTTGCGAATTAAAATTGCCATAGAAACTGCTAGTGCGTTGGCCTATCTCCATGCTTCGGGTATCATTCACCGTGATGTGAAAACCAGCAACATACTCCTTGACAGCAGTTTTTGTGTTAAAGTTGCAGATTTTGGACTCTCAAGACTATTCCCAGATGATGTCACCCATGTCTCCACGGCTCCACAAGGGACTCCAGGTTATGTTGATCCGGAATATCATCAATGTTACCAGCTTACTAACAAGAGTGATGTATACAGTTTTGGTGTTGTGCTCATTGAGCTTATATCATCTAAGCCTGCTGTTGATATAAACAGGAGTAAGGATGAGATTAACTTGTCAAATCTAGCCGTAAAGAAGATTCAAGAAAGTGCAATTGGTGAGCTGGTAGATCCTTCTATTGGTTTTGATTCAGATCAAGATGTTAAGAGGATGATGGTTTCAGTGGCAGAATTGGCTTTTCAATGTTTGCAAAGGGACAAGGAATTGAGACCTTCCATGCAAGAAGTGTTGGATGAATTGTGTAGAATTGAGAGTGGGAAAGATGAGGTGGCGCTTCAAGAGGAGGCAGATGTTCATGGTGTTGGAGTTTCTCACAGTAACGTGCATCCACCATTACTAGCTTCACCTGACTCTGATGAAGTTGGATTATTGAAAAATATGAAGCTGCCGACTTCACCGAACACTGTCACAGATAAATGGGAAAGTGAACGTACCACGCCTAATGTCAGTGGTTAA 2007 0.4225 MTLVYEFLFLLFCHLIMLLPLAAGYQGECPPSFQCGYVGNISFPFTTTERQDCGLLAIHNCDDHPMKPKEIQLVNQGKWFEVIRVVEQVPRSPTVTNFQVRDKYLYQLLQSRNCEAFTYNCTLPPTFHFGAFRIGTKATLFRCNQTLHVRPPTYMYNYTKCHDYDLYYAPEITANDALTACAKVQLPIKDVPDSYDPFTFVNADINVEVKLTDECANCHHLQRGQCQLDNGGRFFCANATAKPKRLRRNVKLCIGLGVGILGILIIGLLLLFLLYKRKHATSGGHLQSGNSYSDSSLNPRSESGSVYFGVPLFSYEKLKEATNNFDHTRELGDGGFGTVYYGKLPDGREVAVKRLYEHNYRRVQQFINEVEILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGGLAKSGLLPGSLRIKIAIETASALAYLHASGIIHRDVKTSNILLDSSFCVKVADFGLSRLFPDDVTHVSTAPQGTPGYVDPEYHQCYQLTNKSDVYSFGVVLIELISSKPAVDINRSKDEINLSNLAVKKIQESAIGELVDPSIGFDSDQDVKRMMVSVAELAFQCLQRDKELRPSMQEVLDELCRIESGKDEVALQEEADVHGVGVSHSNVHPPLLASPDSDEVGLLKNMKLPTSPNTVTDKWESERTTPNVSG 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1718g00009 668 SUPERFAMILY Protein kinase-like (PK-like) 306 595 IPR011009 -
Gabi1718g00009 668 ProSiteProfiles Protein kinase domain profile. 325 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1718g00009 668 Gene3D Transferase(Phosphotransferase) domain 1 402 612 - -
Gabi1718g00009 668 Gene3D Phosphorylase Kinase; domain 1 294 401 - -
Gabi1718g00009 668 SMART serkin_6 325 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1718g00009 668 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Gabi1718g00009 668 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 298 401 - -
Gabi1718g00009 668 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 662 IPR044652 GO:0004672
Gabi1718g00009 668 FunFam Wall-associated receptor kinase-like 20 402 610 - -
Gabi1718g00009 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Gabi1718g00009 668 MobiDBLite consensus disorder prediction 644 668 - -
Gabi1718g00009 668 Pfam Protein kinase domain 327 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1718g00009 668 MobiDBLite consensus disorder prediction 645 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1718g00009 Gabi-Chr1718 68222 72078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1718g00009 33 668 Receptor kinase-like Gene Family AT1G25390 48.527 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gabi1718g00009 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1718g00009 - - gmx:100305407 854.744