Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1717g00005 ATGGAGAATTGCTCTGGAAATGGGGTTCATGATTTCAACATGGCTTCAAGAAAAGCTGAAGAAGCGGCTTGGAGACGATATGAGGCAACTCAGTGGCTAGAAAGCCAAATAGGTCCTCTTGGCATATCCAACCAGCCCACAGAGAGAGAACTTATTTCTTGCTTGAGAAATGGTCTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTACCTAAGCCTTTACCTGCCTATCAGTATTTTGAAAATGTCCGCAACTTTCTGGTTGCAGCAGAAGAATTAAAGATTCCAGCTTTTGAGGCTTCTGATCTTGAGAGGGATAGTGTAGATATGGGATCAGCAGGAAAAGTTGTTGACTGCATTCTAGCACTTAAATCATTTCAAAAGTTGAAGCAGATAAACAATCAGAATGGATCCAACATAAAATCTCCTTTACTTATGAAGTCATTGAGTAGAATGCATTCAAGAGCCACAACCGCATTCCCATCAGATGCATGTAGGCGCTTGGATTTGCCTGACACATTGGAAAAAATGCCTCCTGTTGAGAGTAATTTTGAGAAACGAGAAGCAGAAATTGTGGAATCACTTGTCAAGGTGCTGGTTGACCGTATGTTTGATGCCAAAGAAAATATTGATGGAAACATTATTGAATCTCTTCGTACTGAACACCCGGATCCAATAAAGCTATTGAATCAGATCATAACAAGTTGTAGTAGGGAACAGCCACCTACAAAGTCCCCTGAGTTGTCATTGCCGCTAAAGGATTTAATAAAAGAAAGGAGTAGCTTACCACCTCATTTCACTTCCACAAACACACAATCTGATGCTTTATCTGCACCTGAAAGTTCCAAGTGTGGCAGAGCTTGCCCTGGAAAGTGCACTTGCAATCAGGAGCATCTCTTAGACATGCAGGAAAAGGAACTTCTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAATGAGTTTGAAGAGATGCAGTCACAGTTTCAGAGATTTTTTAATGATATTGGAAGTCAAATACGGGATATGTCAACCAAAGCTCTGGGATATCACAGAGTGGTAGAAGAGAATAGGAAACTATACAACATGGTCCAAGATTTGAAAGGTAATATTAGAGTGTACTGCAGAATCAGGCCCTCATTCCGGCCTGAATGCAAGAATGTTATTGATTTCATTGGGGAAGACGGTTCTCTATTCATTTTAGATCCATCACGAACACTAAAAGATGCAAGGAAACTTTTTCAGTTTAATCGGGTTTTTGGTCCAACAACTGGCCAAGATGAGGTTTTTAAGGACACCAAACCATTAATAAGATCCGTGATGGATGGGTACAACGTCTGTATTTTTGCTTATGGTCAAACTGGATCCGGGAAGACTTACACCATGAGTGGTCCTGAAGGTGGAACATCTAAGGATATGGGGATCAATTTTCTGGCTCTTAAAGATTTGTTTCAAATTTCTAATCAAAGGAAGGACATTATACAGTATGACATTTATGTTCAAATGGTTGAGATTTACAATGAACAAGTTAGAGACCTACTTTTTGCCTCCTTAACTAACCTCAAATTAGAGATCCGTAGCTGCAATGACGACGGGTTGAGCCTTCCTGATGCTATATTGCGTCCGGTGAAGTCTACAGCTGATGTTATGGCCCTCATGAAACTTGGTGAGGTTAATCGTGCCGTCAGTTCCACTGCAATCAACAATAGGAGTAGTCGTTCTCACAGTGTACTTACTGTGCATGTTCATGGCAAAGATACATCTGGGAGCACCATTCGCAGTTGCCTGCACTTAGTAGACCTTGCTGGAAGTGAACGAGTAGACAAGTCTGAAGTCACAGGGGAAAGACTAAAGGAAGCACAATTTATTAACAAGTCTCTTTCCTGTTTGGGAGATGTGATCACAGCCCTGGCTCAAAAGAATTCTCACATCCCTTACAGGAACAGCAAGCTCACACTTCTATTGCAGGACTCCTTAGGTGGACATGCTAAAACGTTGATGTTTGCTCATGTGAGTCCGGAAGCAGATTCCTTTGGTGAAACAGTGACTACTCTAAAGTTTGCTCAGAGAGTTTCCACTGTGGAACTGGGGGTGGCCCGTTTGAACAAAGAAAGCAGCGAGGTTATGCAACTTAAAGAACAGGTTGAAAACCTTAAGATTGCACTGGCAAATAAGGAAGCTCACAAAGCAATGGAAGCTCACAAAGCAATGTTCAATAGAACTAAAGAACCGTACTCTCCATTAGAGAAACCAACACTGGTGTCTGAGAAAACTCCATTCCGCCCTAGAAGACTTAGCATTGAGAATTGCAGCGCCACAAAGCCAGACAACAAATCCCCAGACAACAAATCTGTGAAACCTGAGGACAAAAGTGGAGCCAAATCACCGCTTCTCATACCTCGTTCAAGAAGATTAAGCTTGGAAGGTTCAAAAATTGTTAAACGAAAAGCATCAGCTGATATAAGCAAAACTTTACAATATGAGTCAATGTCTCTGCTGAAATATCGTCCACTGCAAGATCCAGAAGCAGTGTCAAAGCTAAATAGCCATTTCAGCAATGTCAATTCCAGTTCAGAGTTGCAAGCCAAAGCTCCTAAAAGTCCTAAAAGCATTATCAGTCAGAAGAGATTGATTAAAGTGGATAATGGAATCCATATTCATCCTCTTGAACTACCTCAGAAACCTGAACCACCAGTGCTAGATAGAAATGATGCACAAGGAGCTGTGCCGAGTGACCTTATTACATCTTGCAATGATTCCCAGACAACAAAGGTGCTAGGTAGCACAAATGGAAAAGCATCCCAGATAAGAAAATCCTTAAGATCAATTGGTAAACTGATTAATGGCCCTGATAAGAGGGGCCAACAAATTATTATGGTTGAAGTCAAGTCACCCATCAAGGGAGGTGTAAGGAGGCAATCTCTTGAAGGACCAAACTACTCCCGCAGATCTTCTATTGGAGGGAAGCCAATAGCATATGAAAAGGACAGAAATGCTAGAACACCTCCTCCTGACTATTCAGCCACCAAGGCTTCAAAACGGTGGCTATAG 3057 0.4161 MENCSGNGVHDFNMASRKAEEAAWRRYEATQWLESQIGPLGISNQPTERELISCLRNGLILCNAINKIHPGAVPKPLPAYQYFENVRNFLVAAEELKIPAFEASDLERDSVDMGSAGKVVDCILALKSFQKLKQINNQNGSNIKSPLLMKSLSRMHSRATTAFPSDACRRLDLPDTLEKMPPVESNFEKREAEIVESLVKVLVDRMFDAKENIDGNIIESLRTEHPDPIKLLNQIITSCSREQPPTKSPELSLPLKDLIKERSSLPPHFTSTNTQSDALSAPESSKCGRACPGKCTCNQEHLLDMQEKELLDLKALKLKIKNEFEEMQSQFQRFFNDIGSQIRDMSTKALGYHRVVEENRKLYNMVQDLKGNIRVYCRIRPSFRPECKNVIDFIGEDGSLFILDPSRTLKDARKLFQFNRVFGPTTGQDEVFKDTKPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPEGGTSKDMGINFLALKDLFQISNQRKDIIQYDIYVQMVEIYNEQVRDLLFASLTNLKLEIRSCNDDGLSLPDAILRPVKSTADVMALMKLGEVNRAVSSTAINNRSSRSHSVLTVHVHGKDTSGSTIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVTTLKFAQRVSTVELGVARLNKESSEVMQLKEQVENLKIALANKEAHKAMEAHKAMFNRTKEPYSPLEKPTLVSEKTPFRPRRLSIENCSATKPDNKSPDNKSVKPEDKSGAKSPLLIPRSRRLSLEGSKIVKRKASADISKTLQYESMSLLKYRPLQDPEAVSKLNSHFSNVNSSSELQAKAPKSPKSIISQKRLIKVDNGIHIHPLELPQKPEPPVLDRNDAQGAVPSDLITSCNDSQTTKVLGSTNGKASQIRKSLRSIGKLINGPDKRGQQIIMVEVKSPIKGGVRRQSLEGPNYSRRSSIGGKPIAYEKDRNARTPPPDYSATKASKRWL 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1717g00005 1018 CDD CH_AtKIN14-like 25 128 - -
Gabi1717g00005 1018 PRINTS Kinesin heavy chain signature 445 466 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1717g00005 1018 PRINTS Kinesin heavy chain signature 567 584 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1717g00005 1018 PRINTS Kinesin heavy chain signature 646 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1717g00005 1018 PRINTS Kinesin heavy chain signature 597 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1717g00005 1018 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 858 IPR027640 GO:0003777|GO:0007018
Gabi1717g00005 1018 FunFam Kinesin-like protein KIN-14A 314 698 - -
Gabi1717g00005 1018 Pfam Calponin homology (CH) domain 25 128 IPR001715 GO:0005515
Gabi1717g00005 1018 Coils Coil 700 730 - -
Gabi1717g00005 1018 Gene3D Kinesin motor domain 314 698 IPR036961 -
Gabi1717g00005 1018 ProSiteProfiles Calponin homology (CH) domain profile. 23 131 IPR001715 GO:0005515
Gabi1717g00005 1018 SMART ch_5 25 129 IPR001715 GO:0005515
Gabi1717g00005 1018 MobiDBLite consensus disorder prediction 971 1018 - -
Gabi1717g00005 1018 ProSiteProfiles Kinesin motor domain profile. 372 696 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1717g00005 1018 SUPERFAMILY Calponin-homology domain, CH-domain 22 137 IPR036872 -
Gabi1717g00005 1018 Coils Coil 303 330 - -
Gabi1717g00005 1018 Pfam Kinesin motor domain 398 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1717g00005 1018 SMART kinesin_4 370 704 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1717g00005 1018 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 695 IPR027417 -
Gabi1717g00005 1018 Gene3D - 10 153 IPR036872 -
Gabi1717g00005 1018 MobiDBLite consensus disorder prediction 740 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1717g00005 Gabi-Chr1717 38677 45982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1717g00005 360 696 Calmodulin-binding Proteins AT5G65930 44.315 6.97e-74 265