Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1710g00001 ATGTTCCGCCGCGCAACAGCAACCCTTCTTTCCGGCGCCACCCGCCGCCGATTCTCGACGGATCTGCCGGCGGCACCCACCGTAGATTCGAGCTTCGTGGAGGCGTGGAAGAAAGTGAGCCCTAACATAGACCCACCAAAGACTCCCTTTGCTTTCATGAAGCCTCGTCCCCCAACCCCTTCCACGCTCCCTACGAAGCTCACCGTTAACTTCGTCCTTCCTTACACTTCCGAATTATCTGCCAAAGAGGTTGACATGGTCATAGTACCAGCAACAACTGGGCAGATGGGTGTTCTCCCAGGACATGTAGCAACAATTGCAGAGTTGAAACCTGGGGTTCTATCTGTCCATGAGGGGAATGATGTGACCAAGTATTTTGTCAGCAGCGGATTCGCCTTCATCCATGGAAACTCTGTTGCTGATATAATAGCTGTTGAGGCTGTACCAATTGATCAAATTGATTCAAACTTAGTCCAGAAGGGTCTTCAAGAGTTCACTCAGAAGCTTAGCTCAGCCACAACGGATTTGGAGAAAGCCGAAGCTCAGATTGGGGTTGATGTCCATAGTGCTCTCAACTCAGCTCTTACAGGCTAA 594 0.5067 MFRRATATLLSGATRRRFSTDLPAAPTVDSSFVEAWKKVSPNIDPPKTPFAFMKPRPPTPSTLPTKLTVNFVLPYTSELSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVSSGFAFIHGNSVADIIAVEAVPIDQIDSNLVQKGLQEFTQKLSSATTDLEKAEAQIGVDVHSALNSALTG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1710g00001 197 Gene3D - 155 196 - -
Gabi1710g00001 197 FunFam ATP synthase subunit delta 154 196 - -
Gabi1710g00001 197 Coils Coil 162 182 - -
Gabi1710g00001 197 CDD F1-ATPase_delta 67 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gabi1710g00001 197 NCBIfam ATP synthase F1 subunit epsilon 79 182 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gabi1710g00001 197 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 148 IPR036771 -
Gabi1710g00001 197 Hamap ATP synthase epsilon chain [atpC]. 65 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gabi1710g00001 197 FunFam ATP synthase delta 56 153 - -
Gabi1710g00001 197 Gene3D - 61 154 IPR036771 -
Gabi1710g00001 197 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 29 197 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gabi1710g00001 197 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 67 139 IPR020546 GO:0015986
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1710g00001 3 197 Primary Pumps ATPases AT5G47030 75.385 7.92e-108 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1710g00001 K02134 - gmx:100799603 336.265