Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1702g00002 ATGGGGATCCAAACTATGGGGTCTCAAGGTGGTGGAGATAGTAATGGAAAACGGTCACAACTCCAACCTCTAGTGCGGCAAAACTCAATGTACAGTCTCACACTTGATGAGGTTCAGAATCAATTAGGTGATTTAGGGAAGCCGCTAAGTAGTATGAACCTTGATGAGCTTCTAAAAAATGTATGGACTGTCGAGGCAAGCCAGTCCATGGGTATTGACATTGAGGACAGGGCACAAGCTAGTCAAGCTGCTTTGCAGCGTCAGGCTAGTCTGTCATTGACTGGTGCACTAAGCAAGAAGACTGTCGATGAGGTTTGGAGAGATATCCAACAAAAGAAAAATAGTGACGAGAAGAAGTCTCGAGAGAGACAGCCTACTTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTGTTGTTGCAGAAGCATCTTCTAATAGAAAGAATACTGGTATTATAGCTGGGGTTGATTCAAATGTAGCAGTACCACAGTTTCCTCCGCAAGGCCAGTGGATACAGTATCAACAACCATATCAGCATCCACAACAAAGTTTAATGGGGATTTATATGCCTAGCCAGGGTATAGCACAGCCATTGCACATGGGACCTGGTGCTTCATTGGATGTTCCCTTTGCAGATAGTCAGGTGGCATTGCCTTCACCTCTGATGGGAACAGTGTCAGATACACAGACACCTGGAAGAAAAAGGAGCACCCCAGAGGACATGATGGAGAAGACTGTTGAGAGGAGGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAATTGGAGAATAAAGTCTCGCGCCTGGAAGAGGAAAATGAAATGCTGAGGAAACGAAAGGAGCTAGATAAGATGTTGCAATGTGCACCACCTCCAGAACCTAAATATCAACTTCGCCGAATAGCATCAGCTCCATTCTGA 966 0.4555 MGIQTMGSQGGGDSNGKRSQLQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEASQSMGIDIEDRAQASQAALQRQASLSLTGALSKKTVDEVWRDIQQKKNSDEKKSRERQPTLGEMTLEDFLVKAGVVAEASSNRKNTGIIAGVDSNVAVPQFPPQGQWIQYQQPYQHPQQSLMGIYMPSQGIAQPLHMGPGASLDVPFADSQVALPSPLMGTVSDTQTPGRKRSTPEDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENEMLRKRKELDKMLQCAPPPEPKYQLRRIASAPF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1702g00002 321 Gene3D - 249 303 - -
Gabi1702g00002 321 MobiDBLite consensus disorder prediction 298 321 - -
Gabi1702g00002 321 SUPERFAMILY Leucine zipper domain 251 296 IPR046347 GO:0003700|GO:0006355
Gabi1702g00002 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Gabi1702g00002 321 MobiDBLite consensus disorder prediction 236 276 - -
Gabi1702g00002 321 MobiDBLite consensus disorder prediction 222 276 - -
Gabi1702g00002 321 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 25 320 IPR043452 GO:0003700|GO:0045893
Gabi1702g00002 321 CDD bZIP_plant_BZIP46 251 305 - -
Gabi1702g00002 321 Coils Coil 267 294 - -
Gabi1702g00002 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 294 IPR004827 GO:0003700|GO:0006355
Gabi1702g00002 321 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 249 301 - -
Gabi1702g00002 321 SMART brlzneu 247 303 IPR004827 GO:0003700|GO:0006355
Gabi1702g00002 321 MobiDBLite consensus disorder prediction 1 25 - -
Gabi1702g00002 321 Pfam bZIP transcription factor 251 298 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1702g00002 Gabi-Chr1702 45212 50498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1702g00002 22 321 bZIP Transcription Factor Family AT3G56850 55.410 1.57e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi1702g00002 bZIP_1 8.5e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1702g00002 K14432 - gmx:100101875 493.041