Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1698g00001 ATGCAAATGATTAAGAGCTCCGAAAGCACTCTCATCTTCCCTTCTCGCCCTCCCTTCCTCCATGATCATGCTCTCCCTCTCTCTCACCTTGACACTGATCGCAACCTCCACCTCACCTTCCGCTACCTTAGAGCTTACGTCGCCACCGCCACAACCTCCCACGACCCCTTCCTTGTCATCTCTTCTTCCCTATCCGAAGCTCTCGTTCATTACTACCCACTTGCCGGCACGCTTCGCCGCCGCAAAAGCGAAGATCGCCGCCTCGAAATCTGGTGCGAAGCCGGCCAAGGCGTCCCTCTCGTCCGTGCCACCGTGGATTTCACACTTGATTCGGTGAATTATCTCGACGACCCGGCTTCGCATTTCGTCGAACAGTTGGTGCCCGACCCGGAACCCGAAGAGGGGATGGAGCACCCGTGCATGCTTCAAGTGACGGTGTTCAAGTGTGGCGGGTTCACACTTGGGGCGGCGATGCACCACTCGCTGTGCGACGGGATGGGCGGGACTCTGTTCTTTAATGCGGTGGCTGAGTTAGCTCGCGGGGCGACCCGGATAACGGTGGAGCCCGTTTGGAACCGTGAGAGGTTGTTGGGTCCGAGGGACCCGCCCCGAGTGGATTCGGGTTTGATAAGGGAGTTTCTGCGTTTGGAGAAAGGGTTTTTACCGTACGAGCAAGACATTGGTGGTGTTGTAAGAGAATGCTTTCATGTGAGGGATGAATGCTTGGACAAGTTCAAGAGGTCCTTGTTTGACCAATCTGGCTTCAACTTCACCACTTTTGAAGCTCTTGGTGCTTACATTTGGAGGTCCAAGGTCAGGGCCTCGGGAGTCCAGGCTCATGAGAAGGTTAAGTTTGCATACTCAATTAATATACGGAGACTAGTAAAGCCATCACTACCTGCTGGTTACTGGGGTAATGGTTGTGTTCCAATGTATGTGCAGCTGAGTGCCAAAGATTTGATAGAGGAACCCATTTGGGAAACAGCAGAACTAATAAAAAAGAGTAAAAGTAATGTAACTGATGAGTATGTTCGCTCCTTCATAGATTATCAGATGCTGCATTTTGCTGATGGTATCACAGCAGGAAAAGGGGTGAGTGGGTTCACGGATTGGAGACACTTAGGCCATTCAACTGTGGACTTTGGGTGGGGAGGCCCTGTTACTGTTTTGCCACTTGGAAGGAACTTACTTGGGAGTGTTGAGCCTTGCTTCTTTTTGCCTTATTCAACAGCCATTGCGGGGAAGAAGGAGGGGTTCAAGGTTTTGGTGACTTTGACAGAGGCTGCTTTGCCTGCTTTCAGAGAAGACATGCAGGTGTTTGCCAGTAGCCAAGATCAGTGGCCGAGCCATCTATAG 1356 0.5177 MQMIKSSESTLIFPSRPPFLHDHALPLSHLDTDRNLHLTFRYLRAYVATATTSHDPFLVISSSLSEALVHYYPLAGTLRRRKSEDRRLEIWCEAGQGVPLVRATVDFTLDSVNYLDDPASHFVEQLVPDPEPEEGMEHPCMLQVTVFKCGGFTLGAAMHHSLCDGMGGTLFFNAVAELARGATRITVEPVWNRERLLGPRDPPRVDSGLIREFLRLEKGFLPYEQDIGGVVRECFHVRDECLDKFKRSLFDQSGFNFTTFEALGAYIWRSKVRASGVQAHEKVKFAYSINIRRLVKPSLPAGYWGNGCVPMYVQLSAKDLIEEPIWETAELIKKSKSNVTDEYVRSFIDYQMLHFADGITAGKGVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTAIAGKKEGFKVLVTLTEAALPAFREDMQVFASSQDQWPSHL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1698g00001 451 Gene3D - 225 436 IPR023213 -
Gabi1698g00001 451 PANTHER ACYL TRANSFERASE 4 4 440 - -
Gabi1698g00001 451 Pfam Transferase family 4 438 - -
Gabi1698g00001 451 Gene3D - 2 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1698g00001 Gabi-Chr1698 32474 34603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1698g00001 50 422 Monolignol Biosynthesis Gene Families AT5G48930 31.122 1.02e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1698g00001 - - gmx:100817021 775.007