Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1690g00005 ATGGAGAACAACAACCAGCAAGTGCAATCCCAATCAGGTTCATACCCAGCGCAACCCGCAGCGGCGGCGGCGGCGGCGGCTCCATTCCACCACCTCCTACAGCAACAGCAGCAACAGCTTCAGATGTTCTGGTCGTACCAGCGCCAAGAGATCGAGCACGTCAACGACTTCAAGAACCACCAGCTTCCCTTGGCGCGCATCAAGAAGATCATGAAAGCCGACGAAGACGTTCGAATGATCTCAGCGGAAGCACCGATCCTCTTCGCCAAGGCATGCGAGCTCTTCATCCTCGAACTCACCATCCGTTCATGGCTTCACGCCGAGGAGAACAAGCGCCGAACCCTCCAGAAGAACGACATCGCCGCTGCCATTACCCGCACCGACATTTTCGACTTCCTTGTTGATATTGTCCCCAGGGACGACATCAAGGACGATACAGCCGCCGCCGCACTTGTTGGTGGCCCCACCGCTAGCGGTGTTCCTTATTACTATCCTCCTATTGGTCAGCCTGCCGGAATGATGATCGGCCGCCCCGCGCTAGACCCCACCACCGGTGTCTATGTTCAGCCGCCTTCCCAGGCGTGGCAGTCAGTTTGGCAGAGCGCTGCTGAGGATGGGTCTTATGGGAGTGGTGGGAGCAGTGGACAGGGTAATCTTGATGGACAGAGCTGA 672 0.5759 MENNNQQVQSQSGSYPAQPAAAAAAAAPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDIKDDTAAAALVGGPTASGVPYYYPPIGQPAGMMIGRPALDPTTGVYVQPPSQAWQSVWQSAAEDGSYGSGGSSGQGNLDGQS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1690g00005 223 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 25 150 - -
Gabi1690g00005 223 MobiDBLite consensus disorder prediction 198 223 - -
Gabi1690g00005 223 SUPERFAMILY Histone-fold 32 133 IPR009072 GO:0046982
Gabi1690g00005 223 Pfam Core histone H2A/H2B/H3/H4 41 124 IPR007125 GO:0003677
Gabi1690g00005 223 Gene3D Histone, subunit A 27 139 IPR009072 GO:0046982
Gabi1690g00005 223 FunFam Nuclear transcription factor Y subunit gamma 30 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1690g00005 Gabi-Chr1690 93224 97594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1690g00005 1 222 CCAAT-HAP5 Transcription Factor Family AT3G48590 77.778 1.89e-106 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gabi1690g00005 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1690g00005 - - gmx:100818447 322.398