Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1690g00004 ATGGAATGTAATAAAGATGATGCCTTAAGGGCTAAAGAGCTTGCAGAGAAGAAGCTTTTAGAGAGGGACCTTGGTGGCGCGAGAATATTCGCAATAAAGGCTCAAAACTTATATCCCAATCTTGATGGTCTTCCTCAATTGCTGGCAACCATTGAGGTTTATATCTCTGCTGAAAAAAGAGTTAATGGGGAAGTTGATTGGTACAGGGTCCTTGGCGTGCAACCCTTAGCTGATGACGAAACAATTCGAAGATGTTATAGGAAACTTGCTCTTACTCTGCACCCTGATAAAAATAAATCGGTAGGTGCAGATGGGGCATTTAATCTCATCACACAGGCTTGGAGTTTATTATCTGATAAAGCCAAGAGAATCATCTTTGACCAAAAGTACAATTTTTGGGGTATATATCAAGGAATTCAAGTTCGGAAAACTTCTGTACCAGCTAGTCAGAATGGTTTCTTCAATATCTTCAATACTGCTGATTGGAAGGATAGAGATCATAGGAATGCTACTTGTCCCAATCCTACCCCAAATTCTCCTGTGTCATCGAAACAAACATTTTGGACCATGTGCAATTCCTGCAGGACACAATTTGAATATCATACCGTTTATATCAACTGCACTCTTGTCTGCACCAGCTGCAATAAGCCATTTTTGGCTATTGAGGCACCACCCCCACCTTTATACAGAAATGCTTCATCCACTTCAAGAATTTCTCAGATGAAGCAACATAACTTCAACTCAACTAGAATGGAAGGAATTCATGTTTCAGGGAGGACATCAATATCTGCTGCCAACGGTGTCAATTCATCACTTGGTTCAGGTCCTTTCTCTATGCCTGGTGGTATTTCCAGTGTACGGACATCAGCTTCTACTGCTGCTGAAGCTCCCAGTGTTTTTGGGATGTCATGTAAGAATTTGAAGAGAGGGCGTGAAGATTCAACACCTGTCATAAAGGAGGAGGCCCATTTTGGGAAAACTCATGCTGTTAATAGAACTGGTGCTGGTTCAGCTTTTCAGTCCTCTTGTTTTGGTTCAAATTCTGTTCTGAAAGGAGATAGGCCAAGGAAAAAACGGGGCACTGATGAGCATAAAGTTAATAGTGATAGACGAGATATGGAAACTGAAGTATCATTTCAAAATAAACGAATGAACTTGGGTAATGAAACTGGGTCTCAGAAGGATAGTTTTTATACAGGAAGGGTTAATGCTGCTGGAAGCTACAAACCTAATGGTATTAGGGATGTATCACAGCTGCAAATGAAGAACATGTTGATGGAAAAGGCTCGGAAGGAGATTCGTAAAAAACTTGATGAATGGAATGCTTCTTCTGTATCAAAGAATTTAAACAAGTCAAAGAATACTGACACAGAAGTTAGAGAGAAGGACAAAGAAAAGGCTATAAATTATGTAAAACCTGGTGAACAAGAATTTGTTGATTCTGAGACCATCATCAAAAAGTGTTCCTCTTCTGATTCAGAGGTTCCTGATTCTCTTTCCATGAGTGTTCCAGACCCAGATTTCCATGATTTTGATGGGGACCGTGTTGAAAAAGCTTTTGGTGAGAACCAGGTGTGGGCTGTATATGATGATGATGATGGCATGCCCCGCCACTATGCTTTGATCCACAATGTAATCTCAGAGAATCCTTTCAAAATGACGATCAGCTGGCTTAATTCGAAAACCAATGATGAATTGGCCCCAATAAAGTGGGTCAGTTCTGGCTTTCCCAAGACTACTGGGGATTTTCGAATGGGCAAGCGTGAATCCTTTAGCACTCTCAATTCCTTCTCTCACAGGGTTAAGTGGAGAAAAGGTTCAAGAGGGGCTCTACATATATATCCAAAGAAAGGGGATGTTTGGGCTCTGTATCGAAACTGGTCCCTTGATTGGAACGAATTTACTGAAGATGAAATCATACATCAATATGACATGGTGGAAGTGCTTGAAGACTACCTTGAAGAGCAAGGAGTGAATGTTGCTCCACTTGTCAAGGTTCCAGGTTTCAAGACAGTATTCCGCCAGAATGCAGATCCAAGAAAAATCAGGAATATTTTGAAGGCAGAGATGTTTCGTTTCTCACACCAGGTGCCTTCATACTTGCTTACTGGTCAAGAAGGTCATAATGCTCCTAAGGGTTGCTTGGAGCTTGATCCTGCTGCTACTCCTACGGAGCTTCTTCAGGTGGTCACAGAAGATGAATTGATGCACAAAGAGAATTCCAGGGAGGATTGTTTGGTTGAGAGGTGCCAAACAACTAAGGAAGAAGATTCTGTTGAAGATATTCCAGGAAAGGAGGTCGCTGAAGCACTGGGAAAGAAGAGAAGTAGGCCTGAGATTTTGTTTGTATATAAGCGGAAAAGAGCGCGCTATGTAGTGGCAAGTAATTGTTAG 2394 0.4148 MECNKDDALRAKELAEKKLLERDLGGARIFAIKAQNLYPNLDGLPQLLATIEVYISAEKRVNGEVDWYRVLGVQPLADDETIRRCYRKLALTLHPDKNKSVGADGAFNLITQAWSLLSDKAKRIIFDQKYNFWGIYQGIQVRKTSVPASQNGFFNIFNTADWKDRDHRNATCPNPTPNSPVSSKQTFWTMCNSCRTQFEYHTVYINCTLVCTSCNKPFLAIEAPPPPLYRNASSTSRISQMKQHNFNSTRMEGIHVSGRTSISAANGVNSSLGSGPFSMPGGISSVRTSASTAAEAPSVFGMSCKNLKRGREDSTPVIKEEAHFGKTHAVNRTGAGSAFQSSCFGSNSVLKGDRPRKKRGTDEHKVNSDRRDMETEVSFQNKRMNLGNETGSQKDSFYTGRVNAAGSYKPNGIRDVSQLQMKNMLMEKARKEIRKKLDEWNASSVSKNLNKSKNTDTEVREKDKEKAINYVKPGEQEFVDSETIIKKCSSSDSEVPDSLSMSVPDPDFHDFDGDRVEKAFGENQVWAVYDDDDGMPRHYALIHNVISENPFKMTISWLNSKTNDELAPIKWVSSGFPKTTGDFRMGKRESFSTLNSFSHRVKWRKGSRGALHIYPKKGDVWALYRNWSLDWNEFTEDEIIHQYDMVEVLEDYLEEQGVNVAPLVKVPGFKTVFRQNADPRKIRNILKAEMFRFSHQVPSYLLTGQEGHNAPKGCLELDPAATPTELLQVVTEDELMHKENSREDCLVERCQTTKEEDSVEDIPGKEVAEALGKKRSRPEILFVYKRKRARYVVASNC 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1690g00004 797 Pfam DnaJ domain 66 127 IPR001623 -
Gabi1690g00004 797 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gabi1690g00004 797 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gabi1690g00004 797 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gabi1690g00004 797 PANTHER BNAC03G44070D PROTEIN 1 723 - -
Gabi1690g00004 797 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gabi1690g00004 797 Coils Coil 419 439 - -
Gabi1690g00004 797 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gabi1690g00004 797 MobiDBLite consensus disorder prediction 344 375 - -
Gabi1690g00004 797 Gene3D DnaJ domain 64 169 IPR036869 -
Gabi1690g00004 797 Pfam Domain of unknown function (DUF3444) 499 706 IPR024593 -
Gabi1690g00004 797 SUPERFAMILY Chaperone J-domain 61 124 IPR036869 -
Gabi1690g00004 797 SMART dnaj_3 65 122 IPR001623 -
Gabi1690g00004 797 CDD DnaJ 66 119 IPR001623 -
Gabi1690g00004 797 MobiDBLite consensus disorder prediction 351 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1690g00004 Gabi-Chr1690 88086 92197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1690g00004 4 312 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.599 1.29e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1690g00004 - - gmx:100797672 1060.44