Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1690g00002 ATGGTTTCATTTCAAGAGAAATTGAAGGCGTTGTTGAGCCACAGATGGATGGTGTTTGTGTGTGCAATGTGGGATATGTCATTTGTGGGAACAGCTTATATGTTTGGAAGCATATCACCTGTGATAAAGAGTAGCATGGGTTACAACCAGAAGCAGGTGGCTTTCTTGAGTGTGGCTAAGGATTTGGGTGATAACGTTGGCCTTCTTGCTGGGAAAATCAGTGAAATATCTCCCACTTGGCTTGTTATACTTGTTGGTGTTGTTCAGAATTTTGTTGGTTATGGCCTTGTTTGGCTCATTGTCACTCACAGGTTTCCTTCTTTACCTTTGTGGCTGTTATGCATTTTCATCTTCGTGGGACAAAATGGATCTACATACTACAACACAGCTTCTCTGGTTTCCTGTGTGCAAAATTTCCCTGAAAGTAGAGGGCCAGTGGTGGGGATATTGAAGGGATTTGTTGGCTTAAGTGGTGCAATTTGGACTCAAATCATAGCTATGATCAATATCCCTGATCAAGCATCTCTGATTTTCATCGTAGCAGTTGGACCTGCAATGGTTTCTTTCACCCTCATGTTCATCATAAGACCCATTGAAAATTACAAGTTACAATCTAGAGCTTCTGATGGTTCAGGCTTCTTGTTTATCTACAGCATTTGCCTTCTCTTGGCTGCTTATTTGATGGGAATTTTGCTGCTAGAGAATATGCTGGATTTGGAACAAAGCACCATCACATTATTAGCACTTGTTTTGATCATTCTCATATTGCTTCCAATTATAGTTCCTATTCTGTTGGTTTTCTTCTCTGAACCCAAAAGTCATGATGAGGAAACCCTTCTTGAACAACCACCAGTGGCAGCAGCAACTAAATCTATGCATGCAGATGATGAGACTAGTGCTGGTGCCAATCATGTTGAAAATGAGAAGCCTCCAATGCCAGATGTGCTTCCACTCTCAGAAGGGCCAAGAGACATGGTTCAATTTCAAACTAAGCTTTTCCATGCAGTCACTTCAGCCGTGAAGAAAATCAAGCAAAAAAATGGTCCCCATAGAGGAGAGGATTTCACCTTGACACAAGCACTGGTCAAGGCTGATTTTTGGATCATGTTCTTCTCTTTAGTCTTGGGTGCTGGATCAGGTTTGACAATAATAAACAACATGGGTCAGGTTTGTCAATCTTTGGGAGATGACAACATCAATGTTTATGTATCAGTTATCAGCATATCAAACTTCCTTGGTCGTGTTGGTGGCGGCTATTTCTCAGAGGTTATAGTAAGAAATTTTGGGTACCCGAGACTTGTTGCATTGGCAGTGATACAGGCAGTGATGTCATTGGGACTCTCCTACTATGCCTTGGGCTTAGTTGGACAAGTTTATGTGGTGGCAATATCTATGGGTTTTGGTTATGGTGCCCACTGGTCAATTGCACTAGCTGCAGCTTCAGAACTATTTGGCTTGAAGAACTTTGGGAGTTTGTACAATTTCCTTACTATGGCTAGCCCAGCTGGTTCTCTATTTTTATCTGGATTTGTAGCAAGCACAATATACGACTATTATGCTGAGCAACAAGCAAAACACCGAATGCAAACTTATAGAGCCTCGGTTAACTTTGCTATGCCTTATGTCACTGAAAATAATGAGTTGCTGCTTTGCAAGGGAAACATATGCTATTCCCTAACATGTGGAATCTTAGCAGTAGTTTGCTTATTAGCAACTGCTTTGAGTTTGGTCATAGTTCACAGGACTAAGAGGTTCTATGCCCAACTTTATGGGAAGTCTTGA 1782 0.4141 MVSFQEKLKALLSHRWMVFVCAMWDMSFVGTAYMFGSISPVIKSSMGYNQKQVAFLSVAKDLGDNVGLLAGKISEISPTWLVILVGVVQNFVGYGLVWLIVTHRFPSLPLWLLCIFIFVGQNGSTYYNTASLVSCVQNFPESRGPVVGILKGFVGLSGAIWTQIIAMINIPDQASLIFIVAVGPAMVSFTLMFIIRPIENYKLQSRASDGSGFLFIYSICLLLAAYLMGILLLENMLDLEQSTITLLALVLIILILLPIIVPILLVFFSEPKSHDEETLLEQPPVAAATKSMHADDETSAGANHVENEKPPMPDVLPLSEGPRDMVQFQTKLFHAVTSAVKKIKQKNGPHRGEDFTLTQALVKADFWIMFFSLVLGAGSGLTIINNMGQVCQSLGDDNINVYVSVISISNFLGRVGGGYFSEVIVRNFGYPRLVALAVIQAVMSLGLSYYALGLVGQVYVVAISMGFGYGAHWSIALAAASELFGLKNFGSLYNFLTMASPAGSLFLSGFVASTIYDYYAEQQAKHRMQTYRASVNFAMPYVTENNELLLCKGNICYSLTCGILAVVCLLATALSLVIVHRTKRFYAQLYGKS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1690g00002 593 MobiDBLite consensus disorder prediction 290 311 - -
Gabi1690g00002 593 Pfam Nodulin-like 15 263 IPR010658 -
Gabi1690g00002 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 587 - -
Gabi1690g00002 593 SUPERFAMILY MFS general substrate transporter 7 199 IPR036259 -
Gabi1690g00002 593 Gene3D MFS general substrate transporter like domains 356 586 IPR036259 -
Gabi1690g00002 593 CDD MFS_Mch1p_like 14 572 - -
Gabi1690g00002 593 SUPERFAMILY MFS general substrate transporter 204 585 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1690g00002 Gabi-Chr1690 53245 56659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1690g00002 5 593 Nodulin-like Gene Family AT5G14120 52.632 0.0 596