Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi168g00011 ATGAGCACGAAGACAGCGAGACCTCGTACACGTGTGGGGAAGTACGAGTTGGGAAAAACAATAGGCGAGGGAAGCTTTGCGAAGGTCAAGTTCGCGAAGAACGTCGAGACCGGAAACTATGTTGCCATCAAAATCCTCGACCGTAATCACGTGCTCCGCCACAAGATGATGGAACAGCTGAACAAAGAAATTTCAGCGATGAAGCTGATCAATCATCCAAACGTTGTCAAAATATTTGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTCCTGGAGTTGGTTAATGGAGGAGAACTATTTGACAAAATAGCTAAAGATGGGAGACTTAAAGAGGATGAAGCAAGAAGTTATTTCCAACAACTAATCAATGCAGTTGATTACTGCCATAGTAGAGGCGTGTATCACCGAGATTTGAAGCCCGAGAATCTTCTTCTGGATTCAAATGGTGTTCTTAAAGTTTCAGATTTTGGACTGAGTACGTACTCACAGCAGGAGGATGAACTCCTCCGCACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTGCATCTGATATTTGGTCTTGTGGAGTCATTCTCTTTGTACTTATGGCTGGTTACTTGCCGTTTGATGAGCCAAATCAAATGGCACTGTACAAGAAAATTAGCAAGGCTGATTTCGCATGTCCATCTTGGTTTTCACCTGAGGCAAAGAAACTACTGAACTGTATTCTTGACCCAAACCCTCTTACCAGGATAAAAATTCCTGAAATCTTAGAAGATGAATGGTTCAAAAAAGGATACAAGCCAGCATCTTTTACAGAGGAAGAGGATGTAAATGTAGATGATGTAGCTGCTGCTTTCAATGATTCTAAGGAAAATCTCGTGACAGAGAGAAAAGAGAAACCCGAGTCTATGAATGCTTTTGAGCTCATTTCTAGGTCGCAAAGCTTCAATCTTGACAGCTTATTTGAGAAGCAGACAGGGATTGTAAAGCGGGAAACACATTTTACGTCACAGCGCCCTGCAAATGAAATTATGTCTAAAATTGAGGAAGCTGCCAAGCCTCTGGGCTTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAAGGTGATAAAACCGGAAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTCGAAGTGGCTCCCTCTTTGCACATGGTTGAGCTGCGAAAGACTGGGGGTGACACACTAGAGTTTCATAAGTTCTACAAAAACTTTTCATCAGGGTTGCAAGACATAGTATGGCATCCTGAAGAAAAATAG 1305 0.4222 MSTKTARPRTRVGKYELGKTIGEGSFAKVKFAKNVETGNYVAIKILDRNHVLRHKMMEQLNKEISAMKLINHPNVVKIFEVMASKTKIYIVLELVNGGELFDKIAKDGRLKEDEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNGVLKVSDFGLSTYSQQEDELLRTACGTPNYVAPEVLNDRGYVGSASDIWSCGVILFVLMAGYLPFDEPNQMALYKKISKADFACPSWFSPEAKKLLNCILDPNPLTRIKIPEILEDEWFKKGYKPASFTEEEDVNVDDVAAAFNDSKENLVTERKEKPESMNAFELISRSQSFNLDSLFEKQTGIVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKTGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDIVWHPEEK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi168g00011 434 FunFam Non-specific serine/threonine protein kinase 8 309 - -
Gabi168g00011 434 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi168g00011 434 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Gabi168g00011 434 Gene3D Transferase(Phosphotransferase) domain 1 95 296 - -
Gabi168g00011 434 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Gabi168g00011 434 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Gabi168g00011 434 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 415 - -
Gabi168g00011 434 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi168g00011 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Gabi168g00011 434 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi168g00011 434 Pfam NAF domain 307 367 IPR004041 GO:0007165
Gabi168g00011 434 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Gabi168g00011 434 CDD CIPK_C 311 424 - -
Gabi168g00011 434 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Gabi168g00011 434 Gene3D Kinase associated domain 1, KA1 304 430 - -
Gabi168g00011 434 SUPERFAMILY Protein kinase-like (PK-like) 12 297 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi168g00011 Gabi-Chr168 142654 148652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi168g00011 2 432 CBL-interacting serine-threonine protein kinases AT1G01140 75.227 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi168g00011 Pkinase 5.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi168g00011 - - gmx:100794136 801.201