Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1689g00002 ATGGACCACTCACAAATAACAACTATTGAAGACATTGACATAAGTGAAAGTTTGGTATCTTTTGACGATGTTGTTGATTTGGAGAAAGACATTGATGAATTTGGAGGAGATGATCAGTGCGAAATCATGGAAGACAAAGATGGTGATTGTAGGGAATATAATGTACATGAAATTGTGGGAGATGATGATAGTGAATTTAGTGAAACCCCTATTTTGGGTAGAGTCTTTAAGACAGCAGAAGAAGCTTATGATTTTTATAATGATTATGCAGAAGGTAAGGGGTTTGGGATACGTAAGCACTACTATAGCAAGAATACGAAAACACAACAACTATATAGGTGGAGATATGTGTGCTCAAAGCAAGGTGTCGAGAGACTAAATGAAAAAAGAGTTGATGTTCATAATGTCAAAAGGCGAAGGGATACAAGGACTAATTGCTTAGCCATGTTCCAAATAAAGTTAGTAGATGAATCATGGATCGTTGAGAATTTCAATGATACACACAATCATCCATTGATTAACACTCCTACAAAGGTGAAGAAGCTTACTTCTCATAATGATTTACGACGCTCAGAGTATACTAAATCTATTGTTTGTAAGCTTTATCAAGAGGGTTTAACATCTTCAAAAATTTCAAAGGTGGTGAACGCTATGGACAAAGAAGTTAATATTACCCCAGTTCAAATTAGCACTATTATATCAGGCCAAAGAAAGAATAATGTAGGGCGAGAAAGTCAAGGCATCATCAAACACTTTCAAAGGAAGTCTTCTCTTGATGGAGCTTTTTATTTTGATATGCATCTGGCAGAGGATGGCACATTAAGAAGCGTCTTTTGGGCGGATGGTAGGTCGAGAGCTTCTTATGCTCAATTTGGCAAAGTCCTTGTGTTTGATGTGACTTACAAAATAAATAAGTCCAAGTTTCTTTTTGCCCCTTTTGTGGGGGTTAATCACCATGAGCAATCAACTTTATTTGCTGCCGCTTTGTTAGAAGATGAAACAGAGGCAACATTTAAATGGTTATTTGAACAGTTTCGAACATGTATGTTTAACAAGTCTCTGGTTGCTATTATCACTGATCAAGACAAAGCTATGGGAAAAACAATTGCTAAGATATTTCCAGAAGCACGACACCATTTTTGTGCGTGGCACATCAAAAAACATGTTATGGAGCATAGTCAAGCACTGCGAACACAATTTAAAGATAGTTTTGATGTTGACTTTCGTGAGTGGTATAAAAGTCGAAGCTTTCATGAATCTGAAAGCAAGTGGGAAGCAATGAGGACTAAATATGATATTAAAGCAGGTAGTTGGTTGGAAAACATGTATAATTCACGTCACCATTGGGCAAAGGCATACTTGAAAGATACTTTTTTGCCGGAATGA 1386 0.3665 MDHSQITTIEDIDISESLVSFDDVVDLEKDIDEFGGDDQCEIMEDKDGDCREYNVHEIVGDDDSEFSETPILGRVFKTAEEAYDFYNDYAEGKGFGIRKHYYSKNTKTQQLYRWRYVCSKQGVERLNEKRVDVHNVKRRRDTRTNCLAMFQIKLVDESWIVENFNDTHNHPLINTPTKVKKLTSHNDLRRSEYTKSIVCKLYQEGLTSSKISKVVNAMDKEVNITPVQISTIISGQRKNNVGRESQGIIKHFQRKSSLDGAFYFDMHLAEDGTLRSVFWADGRSRASYAQFGKVLVFDVTYKINKSKFLFAPFVGVNHHEQSTLFAAALLEDETEATFKWLFEQFRTCMFNKSLVAIITDQDKAMGKTIAKIFPEARHHFCAWHIKKHVMEHSQALRTQFKDSFDVDFREWYKSRSFHESESKWEAMRTKYDIKAGSWLENMYNSRHHWAKAYLKDTFLPE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1689g00002 461 Pfam MULE transposase domain 294 387 IPR018289 -
Gabi1689g00002 461 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 62 459 IPR031052 GO:0006355
Gabi1689g00002 461 Pfam FAR1 DNA-binding domain 84 173 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1689g00002 Gabi-Chr1689 14009 15394 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1689g00002 MULE 1e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1689g00002 - K17604 lsv:128132274 412.149