Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1686g00003 ATGACAGAGTGTCACGTTCTATGTTCTGAAAACGGTAAATATTGCATGATTTTTAACCAACTCACTCCTGATCAGAACTTCGCTTACTTGCGCATATATGCACAAGGCAATGAAGATTGGCTAGTGTGGGTTGCTAATAGAGATCAACCTGTTGACCAGGATTCAGCAGTTTTATTGTTGGACCACTATGGGGTACTAAAAATAGAATCCAAAGATGGGGATCCAATAATCCTTTACTCTTCACCTCAACCAGTCAACAACACTATGGCTACCTTGTTGAATACGGGCAACTTCGTGCTTCAACAACTTCACCCCAATGGGACAAAGACTGTGTTATGGCAAAGTTTTGATCATCCCACTGACACCTTGATTCCTGGGATGAAGTTAGGTGTTAATCTCAAAACTGGTCATAATTGGTCACTGGTTTCATGGTTCACTGATAACATCCCATCTTCTGGACCGTTCAGGCTTGAATGGGAACCAAGAAGAAGAGAATTGATCATCAGGCGAGGAGCACAAGTCTACTGGACAAGTAAAGAACTGGGAAACAATAGATTCGAGCACATTTCGGGGGAATTCCAGTACGATATTGTCTCAAACGAGAATGAAGAATACTTCACATTGACAACTGGAAATGAAGAGCATACAATATGGACGCTTCTAGGAACTGGTCAGTTGATGAACAGGAAAGGAAATGATATTGCAAGGGCTGATAAGTGTTATGGGTATAATGATGATGGAGGATGCCAAAAATGGGAGAAGATACCCACTTGTAGGGATCCTGGTGATGAATTTGACATCAAGGTAGGTTTCCCCCCTTCTACAAATAACAATATCACAAGCTATCAAGCAAATTCGAGTTATGGCCCAAGTGATTGCCAGGCTTTTTGCTGGAGCAACTGTAGCTGCGTTGGATTCTCAGCATTATATGACAACGGAACCGGTTGTATTTTATGGAATTCTATGGTAGGGATTAGTGTTGCAAGCAGTGGTGGCCAAAAATTTTACGTGAAGGTAAACAATACCCATCGCAAAGGTACTAACAAGTGGATCTGGAAAAGTGCTGTGATTGCAACAACCCTTCTCATAATCTGCCATTCCATTCTATTCCTTGCATTAAAGATAAGAAAATACAAACACAAAGAGAAGGATAGAAAAACAACATTGAATTCCAGGACGTTAGATTTAGAAGTGTCCGGTGGATTCTCCAGTGTCACAGATCCAGAAGATGATTTGAACGAGGGACATGATTTAAAAGTATTTAGCTATTCATCTGTAATGGTGGCTACGAATGATTTTTTATCTGAAAATAAATTAGGAGAAGGAGGATTTGGACCAGTTTATAAGGGAATACTGCCAACAGGGGAAGAAGTTGCTGTGAAGAGACTTTCAAGAACTTCGGGTCAAGGAGTTGTTGAATTTAAAAATGAATTAGCACTCATATCTGAGCTCCAACACACTAATCTCGTTCAGCTACTCGGTCACTGCATACACAAACAAGAGCGGATGTTGGTCTATGAGTATATGCCAAACAAAAGCTTGGACTTCTTTCTATTTGATTCTACTCAAAGAAACTTGCTAGATTGGGGCAAGCGGTTCAGGATAATAGAAGGAATTGCTCAAGGATTACTATACCTACACAAGTATTCTAGACTCAAAATCATTCACAGAGACTTGAAGGCTAGTAACATTCTTCTAGATGAGAATATGAACCCAAAAATTTCTGATTTTGGTATAGCGAGAATGTTTACCCCACACGAATCTGAAGTGAACACCAACAAGATTGTTGGGACAATTGGATACATGTCTCCAGAGTATCTCATGGAAGGAGTTTTCTCTACTAAGTCTGATATCTACAGCTTTGGGGTGTTACTCCTTGAAATTGTTAGTGGTAGAAAAAACAAAAGCTTCTACACTGATGAACGGCCACTCAATCTAGTAGGACATGCATGGGAGCTATGGAAACAAGGTGAGGTTCTTCAGTTAATGGATCCCGCATTAACCGAATCATTTGTTGAGGATGAAGTGTTAAGATGTGTTCATGCTGGTCTCTTATGCGTTGAAGAAAAAGTAGATGATCGCCCCGACATGTCCAACGTTATATCAATGTTAACAAACAAATGTTCAGTTGGCTCTGAGCCAAAAAGACCGGCATACTATTTTAGAGTTTTGGAGGAAAAAACGTTGTCTAAAGAAATCGATATGGATTGCATATGCGAAAATTCCCTTTCTCATGTATATTCAATATAG 2250 0.3991 MTECHVLCSENGKYCMIFNQLTPDQNFAYLRIYAQGNEDWLVWVANRDQPVDQDSAVLLLDHYGVLKIESKDGDPIILYSSPQPVNNTMATLLNTGNFVLQQLHPNGTKTVLWQSFDHPTDTLIPGMKLGVNLKTGHNWSLVSWFTDNIPSSGPFRLEWEPRRRELIIRRGAQVYWTSKELGNNRFEHISGEFQYDIVSNENEEYFTLTTGNEEHTIWTLLGTGQLMNRKGNDIARADKCYGYNDDGGCQKWEKIPTCRDPGDEFDIKVGFPPSTNNNITSYQANSSYGPSDCQAFCWSNCSCVGFSALYDNGTGCILWNSMVGISVASSGGQKFYVKVNNTHRKGTNKWIWKSAVIATTLLIICHSILFLALKIRKYKHKEKDRKTTLNSRTLDLEVSGGFSSVTDPEDDLNEGHDLKVFSYSSVMVATNDFLSENKLGEGGFGPVYKGILPTGEEVAVKRLSRTSGQGVVEFKNELALISELQHTNLVQLLGHCIHKQERMLVYEYMPNKSLDFFLFDSTQRNLLDWGKRFRIIEGIAQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGIARMFTPHESEVNTNKIVGTIGYMSPEYLMEGVFSTKSDIYSFGVLLLEIVSGRKNKSFYTDERPLNLVGHAWELWKQGEVLQLMDPALTESFVEDEVLRCVHAGLLCVEEKVDDRPDMSNVISMLTNKCSVGSEPKRPAYYFRVLEEKTLSKEIDMDCICENSLSHVYSI 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1686g00003 749 Gene3D - 1 117 IPR036426 -
Gabi1686g00003 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Gabi1686g00003 749 CDD STKc_IRAK 439 706 - -
Gabi1686g00003 749 SUPERFAMILY alpha-D-mannose-specific plant lectins 41 147 IPR036426 -
Gabi1686g00003 749 PIRSF SRK 2 240 IPR024171 GO:0004674
Gabi1686g00003 749 PIRSF SRK 234 747 IPR024171 GO:0004674
Gabi1686g00003 749 SMART blect_4 2 119 IPR001480 -
Gabi1686g00003 749 Pfam PAN-like domain 282 321 IPR003609 -
Gabi1686g00003 749 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 99 725 - -
Gabi1686g00003 749 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 509 711 - -
Gabi1686g00003 749 Gene3D Phosphorylase Kinase; domain 1 405 508 - -
Gabi1686g00003 749 SUPERFAMILY Protein kinase-like (PK-like) 417 728 IPR011009 -
Gabi1686g00003 749 ProSiteProfiles Protein kinase domain profile. 433 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1686g00003 749 Pfam D-mannose binding lectin 42 144 IPR001480 -
Gabi1686g00003 749 CDD PAN_AP_plant 281 339 - -
Gabi1686g00003 749 Gene3D Transferase(Phosphotransferase) domain 1 509 715 - -
Gabi1686g00003 749 ProSiteProfiles PAN/Apple domain profile. 258 340 IPR003609 -
Gabi1686g00003 749 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 400 508 - -
Gabi1686g00003 749 ProSiteProfiles Bulb-type lectin domain profile. 1 113 IPR001480 -
Gabi1686g00003 749 Pfam Protein tyrosine and serine/threonine kinase 436 703 IPR001245 GO:0004672|GO:0006468
Gabi1686g00003 749 SMART serkin_6 433 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1686g00003 Gabi-Chr1686 56505 61750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1686g00003 405 722 Receptor kinase-like Gene Family AT3G45860 55.000 1.85e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1686g00003 PK_Tyr_Ser-Thr 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1686g00003 - - gmx:100820258 953.74