Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1680g00026 ATGGCTGCGAAAAGGTTTTTTGATAATTCTGATCAAGACCCTGATAAGCCAAACGACAAACGAATGAGAGCTACTAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTGGTTATGGCGAAAAACTTGCAAAACCTTTTATCAGGCTTGGAACCTTTGCTTAGAAGAGTGGTGAGTGAAGAGGTTGATAGAGCTATGAGACAACGCTGTCCGCGCTCTATTACTAGGTCTCCTTCAATGAGAATCCAAGCAATGGAACAACAATCAAGCTTGCAACTCTCATTCAACAAAAGGCTTTCACTCCCAATTTTCACAAGTAGCCGAATACTTGACATTGATGGTAACCCCATCAACATAATTCTTGTTAACAAAAGTGATGATGGCCAAATGGTTCAAACAAGTGTTCCTTATCCAATAAAGCTAGAGATTGTGGTTCTTGATGGAGATTTTCCACCAAATGATAATGAGGATTATTGGACAAGTGAGCAATTCAATAACCACATAGTGAAAGAGAGAACTGGTAAGAGACCATTGATTGCAGGAGAATTGAACCTTACCATGAGGGATGGAATTGCACCAACTGGTGACATAGAGTTCACAGATAACTCTAGTTGGATACGTAGCAGGAAGTTCAGAGTTGCAGTGAGGGTGAGTCCAGGGAATAATCAAGGTCTTCGGATTCGTGAAGCCATGACCGAGGCATTTACCGTGAAGGATCACCGTGGAGAATTGTACAAAAAACACCACCCACCAATGCTTCATGATGATGTGTGGCGCCTAGAGAAGATTGGGAAAGATGGAGCTTTCCACAAAAAATTGTCCTCAGAGGGAATCAAAACAGTACAAGACTTTCTCAAGTTAGCAGTTATTGATCCCCGTAGGTTAAGAAAGATTTTAGGCATTGGTATGTCAGACAAAATGTGGGAAGTGACAATCAAGCATGCACTAACTTGTGACATGGGCTGCAAGATCTATATATACCGTGGACCTCATTTTACTATTTTTCTGAATCCAATATGCAGATTAATTAGAGCTGATATAGATGGACACATATTTCCAAGCAGAGACCTAAGCCATATGAATAAGAGCTATATAGAAAAATTGGTGAGAGAAGCATATGCAAGATGGCATACCTTGGAGGAAATTGATGCTGTTTTGAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAACAGTGGAGCAATATCCAAACAATCATCCAGCATCGGTAGTAACATATGAACAGAACGATTATTATGGTGACAAATCTGTAGAGGTTTCAAGCTATGTACCTAGCAATAACACACAAATGGGATGCTATGAGTGGCCACTGAATCCAGCCTATACCACAGCATCATTCTCAAATGGATTTCCTTATGGCTTTTCAGAGTCTCAATCAGATGATTGCATAAAGCCTTCAGGTTCGGGTTCTGTTGACATTGATTAG 1446 0.4039 MAAKRFFDNSDQDPDKPNDKRMRATRPSFASVIGEVVMAKNLQNLLSGLEPLLRRVVSEEVDRAMRQRCPRSITRSPSMRIQAMEQQSSLQLSFNKRLSLPIFTSSRILDIDGNPINIILVNKSDDGQMVQTSVPYPIKLEIVVLDGDFPPNDNEDYWTSEQFNNHIVKERTGKRPLIAGELNLTMRDGIAPTGDIEFTDNSSWIRSRKFRVAVRVSPGNNQGLRIREAMTEAFTVKDHRGELYKKHHPPMLHDDVWRLEKIGKDGAFHKKLSSEGIKTVQDFLKLAVIDPRRLRKILGIGMSDKMWEVTIKHALTCDMGCKIYIYRGPHFTIFLNPICRLIRADIDGHIFPSRDLSHMNKSYIEKLVREAYARWHTLEEIDAVLNDNIALLTQGDQTVEQYPNNHPASVVTYEQNDYYGDKSVEVSSYVPSNNTQMGCYEWPLNPAYTTASFSNGFPYGFSESQSDDCIKPSGSGSVDID 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1680g00026 481 Pfam Calmodulin binding protein-like N-terminal domain 90 239 IPR046831 -
Gabi1680g00026 481 Pfam Calmodulin binding protein C-terminal domain 322 381 IPR046829 -
Gabi1680g00026 481 MobiDBLite consensus disorder prediction 1 25 - -
Gabi1680g00026 481 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Gabi1680g00026 481 PANTHER OS02G0177800 PROTEIN 1 453 IPR012416 GO:0005516
Gabi1680g00026 481 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1680g00026 Gabi-Chr1680 232733 237692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1680g00026 3 383 Calmodulin-binding Proteins AT5G57580 48.705 3.07e-117 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1680g00026 - - gmx:100803213 722.235