Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1680g00017 ATGTACACATCAAGGAAGAAAATCCACAAAGATAAGGATGCGGAGCCAACTGAGTTTGAGGAATCAGTTGGACAGGCATTGTTTGACCTGGAAAATACCAACCATGAACTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCAGTCCAAATTGATGTTTCTGGGAACCGCAAGGCTGTAGTTATCCATGTCCCCTACAGATTAAGGAAGGGTTTCCGGAAGATTCATGTCAGGCTTGTCAGAGAGCTTGAGAAGAAATTTAGTGGAAAGGATGTAATCTTGACTGCCACCCGGAGGATATTAAGGCCACCAAAGAAAGGTTCTGCTGCTCAGCGTCCCCGCACCCGAACACTCACTGCTGTGCACGAGGCAATGCTGGAGGATGTTGTATTGCCTGCTGAGATTGTTGGAAAGCGTGTTAGGTATAGAATCGATGGATCCAAGATCATGAAGGTGTTTTTGGACCCTAAGGAGCGAAACAACACTGAGTACAAGTTGGAGACTTTTTCTGCAGTATACAGGAAACTTTCGGGCAAAGATGTTGTGTTTGAGTATCCAATTGCAGAGGCTTAG 576 0.4427 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNHELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILTATRRILRPPKKGSAAQRPRTRTLTAVHEAMLEDVVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFEYPIAEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1680g00017 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gabi1680g00017 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gabi1680g00017 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1680g00017 Gabi-Chr1680 110075 112365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1680g00017 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.581 2.18e-113 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1680g00017 K02993 - gmx:100527680 363.614