LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi1679g00018	ATGGAGTTTGGGATTGATGGCTCTATTAATGGCAATACAATAGTAGGAAATGCTGCTATGGGTGAGGTTAGTAGCATAGCTGATATTGAAAACAGAACAGGTGGAAGTTCTGTTGAACCGACTTACAAACAAGATCAAGATGATAATATGACTCAGGATTCTTCTGGAGGGGTTACAATCCCATTAGCAGTTCCCACAGTATCAGTTGTTTCAGCTGATGAGCCCTATGTGGGTCAGGAGTTTGAGTCGGAAGCAGCAGCACATGCTTTTTATAATGCATATGCCACACATGTTGGATTCATCATTCGTGTAAGTAAACTCTCACGATCAAGGCGCGATGGATCTGCTATTGGACGGGCTCTTGTTTGCAACAAAGAGGGTTACGGAATGCCTGACAAGCGGGAAAAGATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTTAGTTCTGGTAAATGGGTTGTTACAAAGTTTGTAAAGGAGCACACACATCCTCTGACTCCTGGAAAAGGTAGAAGGGATTGCATTTATGAACAATACCCGAATGAACATGATAAAATTCGGGAACTATCTCAGCAGTTGTCAACGGAGAGAAAGCGATCTGCGATCTATAAAAGACATCTCGAATTGATATTTGAGCACATCGCGGAGCATAATGAGAACCTTTCTAAGAAAATACAGCACATAGTAGACAGTGTGAAGGAGATGGACAAAAAAGATCAACATAGCCAATGA	762	0.4226	MEFGIDGSINGNTIVGNAAMGEVSSIADIENRTGGSSVEPTYKQDQDDNMTQDSSGGVTIPLAVPTVSVVSADEPYVGQEFESEAAAHAFYNAYATHVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYGMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLSTERKRSAIYKRHLELIFEHIAEHNENLSKKIQHIVDSVKEMDKKDQHSQ	253

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi1679g00018	253	MobiDBLite	consensus disorder prediction	31	57	-	-
	Gabi1679g00018	253	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	16	244	-	-
	Gabi1679g00018	253	Pfam	FAR1 DNA-binding domain	90	176	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi1679g00018	Gabi-Chr1679	128932	131561	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Gabi1679g00018		FAR1	1e-29	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi1679g00018	-		-	gmx:100777092	402.134