Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1670g00012 ATGTTCTTGTTTCGTTTCGCAGCAACATTTATAGCACTCCTCATCTTCCTCTATCGTTTCCATCAGAAACGATGCTGTAGAAACCCCACCTTCTTAATAAACTGGCCTTTCCTTGGTAATTTACCACAAGTCCTATGTAACTTGTGGCGGATACATGATTTTGTAACCGATGCTTTGAAACCACAAGGTGGCACTGGTGTGTTTATTGGACCTTGGTTTACCAACATGAACTTTTTGATCACTAGTGACCCCATGAACATTCACCACATCATGAGCAAGAGTTTTGACAACTACGTTAAGGGACCCGAGTTTCGTGAGATTTTTCAAGCTTTCGGAGATGGGATATTCACTGCTGATTCAGATACATGGAAATACAACAGGTCTCTCTTCCATTCCTTGTTCAAACAAAGAAGCTTTGAGGTTTTTCTTGTGAAAACCATTCAGAAGAAGGTTGAGATAAGGTTGCTTCAAATATTGGATCATGTTCAAAGACAAGGGATTGTGGTGGATCTCCAAGATGTGTTCAACCGTTTCACATTTGATAACATATGCTCCATAGTTCTTGGACATGATCCTAATTGTCTTTCCATTGATTTCCCAGAAGTTGCATGTGAGAAGGCTTTTAATGAAGCAGAAGAGTGTATATTCTACAGACACATAGTTCCAAGCAGTGTTTGGAAGTTGCAAAAATGGCTTCAAATTGGTCAAGAGAAGAAGATGACAGAAGCATGTAAAACATTTGATGAATTCCTTTATGCATGTATAGCATCTAAGCGTGAAGAGCTAAGCAAGTACACCGAAAGTGAAATGGCTGAAGCTCACGTTGATGACTTGCTAGCAGCTATGATCATGAGAGAGGAAAAGGGACAAGTACGTGATGACAAGTTTCTAAGAGATGCATCATTCAATCTTTTTGTAGCAGGAAGAGATACCATAACTTCAGCACTCACTTGGTTCTTCTGGCTTGTTGCTACACATCCATTAGTGGAAGCCAAGATTCTTGAAGAGATCAAAGAAAAGTTAGGGGACGAAGGAGAGAAGAATAAGCAAGGGGTTTTAGGTGTGGAGGAGGTGAAAAAACTAGTTTATCTCCATGGTGCTATATGTGAAGCTTTGAGGCTTTTTCCTCCAATACCTATTGAGCGCAAGCAAGCATTAAAAGGTGACATACTTCCAAGTGGTCACATTGTTAATCCCAATTCAATGATATTATGTTCTTTGTATGCAATGGGGAGATTTGAAGAAATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGGTCTCTGAGAGAGGAAGCATTGTTTATGCACCATCTTACAAATTCATCAGTTTTAATGCAGGACCAAGGACTTGTTTGGGCAAAGACTTGTCCTTTATTCAAATGAAGATTGTGGCAACTGCTATTTTGTACAACTATCGTGTTCATGTGGTGGAAGGTAATTTTGTTACACCGAGTCACTCAATTGTACTTCTTATGAAGTATGGTCTGAAGGTTAGGCTAACAAAAAGAAGAATTTGA 1527 0.3955 MFLFRFAATFIALLIFLYRFHQKRCCRNPTFLINWPFLGNLPQVLCNLWRIHDFVTDALKPQGGTGVFIGPWFTNMNFLITSDPMNIHHIMSKSFDNYVKGPEFREIFQAFGDGIFTADSDTWKYNRSLFHSLFKQRSFEVFLVKTIQKKVEIRLLQILDHVQRQGIVVDLQDVFNRFTFDNICSIVLGHDPNCLSIDFPEVACEKAFNEAEECIFYRHIVPSSVWKLQKWLQIGQEKKMTEACKTFDEFLYACIASKREELSKYTESEMAEAHVDDLLAAMIMREEKGQVRDDKFLRDASFNLFVAGRDTITSALTWFFWLVATHPLVEAKILEEIKEKLGDEGEKNKQGVLGVEEVKKLVYLHGAICEALRLFPPIPIERKQALKGDILPSGHIVNPNSMILCSLYAMGRFEEIWGKDCLEFKPERWVSERGSIVYAPSYKFISFNAGPRTCLGKDLSFIQMKIVATAILYNYRVHVVEGNFVTPSHSIVLLMKYGLKVRLTKRRI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1670g00012 508 Gene3D Cytochrome P450 15 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PANTHER CYTOCHROME P450 23 500 - -
Gabi1670g00012 508 Pfam Cytochrome P450 32 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 SUPERFAMILY Cytochrome P450 19 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1670g00012 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Gabi1670g00012 508 CDD CYP86A 67 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1670g00012 Gabi-Chr1670 74826 76352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1670g00012 3 506 Cytochrome P450 AT4G39490 47.093 5.39e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1670g00012 - - gmx:100792360 754.977