Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1669g00017 ATGGATTCCAATTGGGAACAGAATCAGCTTCCAAAAAGTTCACCTCATATTGCAGATGCAGATGACTATAATGCATGCGTCTATGCTATGCAACTCAGTTGTAGTCCAATGATGTATTGTGCAGTATTGAATGCTGCCCTTGAACTCAACTTGTTTGAGATAATAGCTAAGGCAACCCCACTTGGTGTATCCGCATCTGACATTGCTTCTCAACTTCCAATACAGCACCCTGAATTGCCTCGTAGGCTTGACCGCATGCTGTGTCTTCTAGCAAGTCACTCTCTTCTTACTTGTTCCACTCGCACAAATGACAACGGTGCAACAGAAAGAATTTACCAGCTATCACTTGCTGGTAAATACTTTGTCAATGATGAGAATAAGGGCACTGTAGCTTTATTCCCAATTTTTCTGAGTCACCGATTAATTGTGGATGCTTTCATCAATTTCAAGGAGGTACTTCTTGACTGTGATAGTAGCTTATTCAAGAAAATTCATGGGATGCCTATATATCAAGGCATACAGTCAGATCCTGCATTGGATTATGTTTTTAACAAAGCAATGTCCAACTTTTGCACAATCCAGATGAAGAATATTCTTGAAATATATAGTGGATTTGACGGAATATCATTGCTAGTTGATGTGGGTGGTGGCATTGGCAAAAATTTGAATATGATAATTTCCAAGTATCCTTCCATAAAGGGTATTAATTTTGATCAGCCCCAAGTGATAGAAAATGCTCCAACTTATCCAGGGATAGAGCAAGTTGGAGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCCATAATATTGAAGGCAGTATTGCACAATTGGTCTGATGAAAATTGTTTAAAAGTTCTAAGCAATTGCTATGAAGCTTTGCCACAAAATGGGAAGGTGATCGTTGTGGACTTCATAATGCCTGAAACAATTCAGTCTACAGAAGCAGATAAGATTGTTACTGGTGTAGACAACCTCATGTTTTTGGATGGTGGGAGCGAAAAAACCGAGAAAGAATTTGAGAATTTATGCAAAAGCTCTGGATTTTCTAATTTCCAAGTTGTTTGTTGTGCCTTCTCTGCTCTCGGGGTTATGGAATTTTATAAATGA 1110 0.3874 MDSNWEQNQLPKSSPHIADADDYNACVYAMQLSCSPMMYCAVLNAALELNLFEIIAKATPLGVSASDIASQLPIQHPELPRRLDRMLCLLASHSLLTCSTRTNDNGATERIYQLSLAGKYFVNDENKGTVALFPIFLSHRLIVDAFINFKEVLLDCDSSLFKKIHGMPIYQGIQSDPALDYVFNKAMSNFCTIQMKNILEIYSGFDGISLLVDVGGGIGKNLNMIISKYPSIKGINFDQPQVIENAPTYPGIEQVGGDMFESVPKGDAIILKAVLHNWSDENCLKVLSNCYEALPQNGKVIVVDFIMPETIQSTEADKIVTGVDNLMFLDGGSEKTEKEFENLCKSSGFSNFQVVCCAFSALGVMEFYK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1669g00017 369 SUPERFAMILY "Winged helix" DNA-binding domain 21 125 IPR036390 -
Gabi1669g00017 369 Gene3D - 39 198 IPR036388 -
Gabi1669g00017 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 367 IPR029063 -
Gabi1669g00017 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 369 IPR016461 GO:0008168
Gabi1669g00017 369 PANTHER O-METHYLTRANSFERASE 40 359 IPR016461 GO:0008168
Gabi1669g00017 369 Pfam Dimerisation domain 42 91 IPR012967 GO:0046983
Gabi1669g00017 369 PIRSF O-mtase 8 369 IPR016461 GO:0008168
Gabi1669g00017 369 FunFam Caffeic acid 3-O-methyltransferase 6 121 - -
Gabi1669g00017 369 Gene3D Vaccinia Virus protein VP39 180 358 IPR029063 -
Gabi1669g00017 369 Pfam O-methyltransferase domain 157 350 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1669g00017 Gabi-Chr1669 165846 167698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1669g00017 22 359 Monolignol Biosynthesis Gene Families AT5G54160 49.560 1.16e-110 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1669g00017 - - gmx:100784030 555.829