Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1668g00014 ATGAGTCGAGGAGGCGCAGGTGGGCTCAAGGGAAAGAAGAAAGGGGTGACATTCACCATTGACTGTGCAAAGCCGGTGGAGGATAAGATCATGGACATTGCCTCTCTTGAGAAGTTTCTTCAAGAGAGGATCAAGGTCGGTGGCAAGGCTGGTGCTCTTGGTGAAGTAGTCTCTGTTACCCGTGAGAAGAGCAAGATCACTGTTACCTCTGACAGTAACTTCTCCAAACGGTACTTGAAGTATTTGACTAAGAAATACCTGAAGAAACACAACGTTCGTGACTGGCTCAGAGTGATTGCCTCAAACAAAGATAGAAATGTTTATGAACTGAGGTACTTCAACATTGCCGAGAACGAGGGAGAGGAAGAAGATTAA 375 0.4587 MSRGGAGGLKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGEVVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1668g00014 124 Gene3D - 7 124 IPR038526 -
Gabi1668g00014 124 PANTHER 60S RIBOSOMAL PROTEIN L22 3 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gabi1668g00014 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Gabi1668g00014 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1668g00014 Gabi-Chr1668 116646 118267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1668g00014 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.097 2.06e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1668g00014 K02891 - csav:115723248 214.927