Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1668g00010 ATGGGTATCGATCTCAAGGCTGGGGGTAAGAGCAAAAAGACCAAACGAACAGCACCCAAATCCAATGATATCTACCTCAAGCTCCTTGTCAAGCTTTATCGCTTCCTTGTTCGAAGGACTGGCAGCAAGTTCAATGCTGTAATACTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCAATTTCTTTGTCAAGGCTAATTAAGTACACGAAGGGCAAGGAAGACAAAATTACTGTTGTAGTTGGGACTGTAACTGATGATATCAGAGTACATGATGTTCCAGCTTTAAAAGTTACTGCCCTCAGGTTTACAGAGAGAGCACGTGCAAGAATAGAAAAGGCGGGTGGTGAATGCTTGACTTTTGATCAGCTTGCCCTGAGGGCTCCTCTTGGACAGAACACGGTCCTTCTTCGAGGCCCAAAGAATGCTCGGGAAGCTGTGAAACATTTTGGTCCTGCTCCTGGTGTGCCACACAGCCATAGCAAGCCTTATGTACAATCTAAAGGAAGGAAGTTCGAAAGGGCTAGAGGAAGGAGGAAGAGCAGAGGGTTTAGGGTTTGA 564 0.4592 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPISLSRLIKYTKGKEDKITVVVGTVTDDIRVHDVPALKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVQSKGRKFERARGRRKSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1668g00010 187 MobiDBLite consensus disorder prediction 152 187 - -
Gabi1668g00010 187 Gene3D - 1 187 - -
Gabi1668g00010 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Gabi1668g00010 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Gabi1668g00010 187 FunFam 60S ribosomal protein L18 1 187 - -
Gabi1668g00010 187 MobiDBLite consensus disorder prediction 173 187 - -
Gabi1668g00010 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1668g00010 Gabi-Chr1668 75274 78526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1668g00010 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 78.495 5.74e-104 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1668g00010 K02883 - egr:104415617 308.916