Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1668g00001 ATGGTTTTTATGCATGTGTTTTTCCTAGTAGCTTGTGTGGTACTTTCGGGTTTCCTTGGTGTTTGCCAAGGAGGCAGCCTCAGGAAGGAGTTCTACCGGCATTCCTGCCCTCAAGCAGAGGACATCATAAACAACAAAATCCAGCAGCATGTCTCTGCTAATCCCAATTTGCCCGCCAAGTTACTTAGAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGCTCAGTTTTGGTGAACTCCACTGCCAGTAATTCTGCAGAGAAGGATGCAATTCCTAATTTGACATTGTCTGGCTTTGATGTAATTGATGATATTAAAGCTGCTGTGGAAGCAAAATGTCCCAAAACTGTATCTTGTGCTGACATTGTGGCATTGGCAGCTAGGGACGCTGTTTCTGTCCAATTTAAAAAACCAATGTGGGAAGTGCTCACTGGTAGAAGAGATGGCATAGTATCGAAAAGTAGCGAAGCCTTGGCCAATATCCCACCATTTTTCTTCAACTTCACCCAACTCAGAGCTAGCTTTGCTAGTAAAGGTCTCGATGTGCACGATCTGGTTGTATTATCAGGAGCACACACAATTGGAGTAGGTCATTGCAGCTCGTTCAGTAGCAGGCTTTATAATTTCACGGGAAAAGGTGATCAAGACCCTTCTTTGAATCCCACTTATGCTGCATTTTTGAAGACTAAATGCAAGAGCCTCAGTGACACAACCACAACGGTAGAGATGGATCCTGGCAGCTCTACCAAATTCGATAGTCACTATTATCCAAACCTTTTCCAGAAAAAGGGTCTGTTCCAATCAGATGCTGCCCTTCTAACAAAAGATGTGTCAATAGATATTGCCAAAAAATTGGTTGACCAAAACAAGTTCTTCACAAGATTCGCGCATTCAATGAAGAGGATGGGAGCCATTCAGGTCCTCACAGGCTCCGCTGGGGAAATTCGGATTAAGTGCTCGGTTATCAACTCTTAA 981 0.4363 MVFMHVFFLVACVVLSGFLGVCQGGSLRKEFYRHSCPQAEDIINNKIQQHVSANPNLPAKLLRMHFHDCFVRGCDGSVLVNSTASNSAEKDAIPNLTLSGFDVIDDIKAAVEAKCPKTVSCADIVALAARDAVSVQFKKPMWEVLTGRRDGIVSKSSEALANIPPFFFNFTQLRASFASKGLDVHDLVVLSGAHTIGVGHCSSFSSRLYNFTGKGDQDPSLNPTYAAFLKTKCKSLSDTTTTVEMDPGSSTKFDSHYYPNLFQKKGLFQSDAALLTKDVSIDIAKKLVDQNKFFTRFAHSMKRMGAIQVLTGSAGEIRIKCSVINS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1668g00001 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Gabi1668g00001 326 FunFam Peroxidase 30 171 - -
Gabi1668g00001 326 PANTHER PEROXIDASE 25-RELATED 12 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 SUPERFAMILY Heme-dependent peroxidases 27 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 ProSiteProfiles Plant heme peroxidase family profile. 26 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 Gene3D - 30 325 - -
Gabi1668g00001 326 CDD secretory_peroxidase 27 324 IPR033905 GO:0004601|GO:0042744
Gabi1668g00001 326 Gene3D Peroxidase, domain 2 164 304 - -
Gabi1668g00001 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 FunFam Peroxidase 164 304 - -
Gabi1668g00001 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1668g00001 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1668g00001 Gabi-Chr1668 7573 16353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1668g00001 7 326 Peroxidase AT1G05260 56.656 1.59e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1668g00001 K00430 - gmx:100799691 543.502