LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi1662g00030	ATGGCAACAGTGGCGGCGCTCTTTTCCCACCTCCGCCGTTCACGTCAATCCTCCTCCCTTTCCCTTTCCCTCCTCTCTCTGCCACGTGTCCTCACCTCTCACCACCCTCCTCCTCTTCCCGCTTCCGCCACACCTCACTCTCCAACCCTCCCGTTTTTCGGCGCGTTCCGCTCCCGCGCTTTCTCGACTCGTTTTTCTTCTGATGACCGCGAATCGGTGATGGACTCGCTCGGTGTCGACTCGCCGGTTAACTCGGAGCTTCTTAAAGTGATCGCTGACAGCAGTGGCGGCGGTGAAGACAACCCGGTTTTCCCCGTTCGTGCGGTGATTTGGATGCTTGATTCATTCCACGATCTTTCTGGATTTCCATGGTGGATAACTATTGTTTCCTCTACTTTGGCTCTCAGAATTGTTCTGCTTTTTCCTCTGGTTTTAACACTTCACAAGGTTAAAAGGATTGGGGAATTTTTTCCTAAATTGCCTCCTCCATTCCCACCACCTTTCTCAGGAAAGAGTTATATTCGTCAATTTATATTCTTCCAGAAGGAGAGAAAAGCAGTTGGATGCCCCTCATATGTGTGGCCACTGGTACCAATTATTGTCCAGATTCCATGTTTTTTCCTGTGGATGATTAGCATAAGGAAGATGTCACTGGATGGTCACCCTGGTTTTAATTGTGGTGGTGCTTTATGGTTCCAGAATTTAACAGAACTCTCTCACGGTTATTCAGGGTTCATCTTTCCTTTTCTGATTGCTGGTTTGCACTACGTTAATGTTCAGATATCCTTTCGGAAACCTCTGGTCGAAGAAACAAGGAACATTTTTGACTTATTAGCCAAATACTACAAACGATACTTGGACTTTCTAACATTGCCTATAGTTTACATTGGCTTTTGTATTCCTCAGGGGAGCCTACTTTATTGGATTACCAATAGTTCATTAACCCTCGTTCAGCACGTAGCTCTTAGACATCCTGCTGTCCTTGCAAAGTTGGGTTTACAAGACAAGAATAGTCAAACTGCAGCTTCTGAGGAAATTGGTGTTGCTAAAACATCCCCTTCACTGGGGTTACAAGACAGTAGTCCAACAGCAGCTACCAAGGAAACTGTTTCTCCTGAAAAAAACCCTCTGGATTCACCTGAAAAGTGGCACAAAATACCTATAGAGGACATGTCGCCTAAAGAACTGACTGCTCTTTCAATCCCATTTCTATCCGATGATGATAAAGAAAGTGCAATTCCTTTACTAAAACTAGCACTTGATAAGGATCCTGAATATGTACGAGCTTTGGTTTTGATGGGACGAGTTCTATTGCTGAAGCATATAAATGATGAAGCTAATGAGTACTTTGAGCGTGCAATATCAAAGCTTTCTCTTGCTGGTCATCCAACTGATGCGGAAGATGTTGATCTTTTGATTCTTTCATCCCAATGGGCCGGAGTTGCTTGTGAACGACAGGGAAAGAGGGCCGAAGGACGTGCACACTTTGAAAGAGTTGCAAATATGGAGGAGCCCGAAGATCCTACTAGCAAAGGTTATTATTTTGATGGGTTGCTGTTGCTTGCCAGCACTCTTTTTGATGCGGGTCACAAGGCTGAAGCTGCAAAGTACCTGCGTCTTGTTGTTGCTTATAAACCTGGTTATAAAAAATTCTTGGAACAGTGTGAGCGAGATGATGATGATGATGCTGATGCTGATGACATTGCTAGTGATCTTGCCCGTAGTAGGAGAGAACTCTGA	1740	0.4489	MATVAALFSHLRRSRQSSSLSLSLLSLPRVLTSHHPPPLPASATPHSPTLPFFGAFRSRAFSTRFSSDDRESVMDSLGVDSPVNSELLKVIADSSGGGEDNPVFPVRAVIWMLDSFHDLSGFPWWITIVSSTLALRIVLLFPLVLTLHKVKRIGEFFPKLPPPFPPPFSGKSYIRQFIFFQKERKAVGCPSYVWPLVPIIVQIPCFFLWMISIRKMSLDGHPGFNCGGALWFQNLTELSHGYSGFIFPFLIAGLHYVNVQISFRKPLVEETRNIFDLLAKYYKRYLDFLTLPIVYIGFCIPQGSLLYWITNSSLTLVQHVALRHPAVLAKLGLQDKNSQTAASEEIGVAKTSPSLGLQDSSPTAATKETVSPEKNPLDSPEKWHKIPIEDMSPKELTALSIPFLSDDDKESAIPLLKLALDKDPEYVRALVLMGRVLLLKHINDEANEYFERAISKLSLAGHPTDAEDVDLLILSSQWAGVACERQGKRAEGRAHFERVANMEEPEDPTSKGYYFDGLLLLASTLFDAGHKAEAAKYLRLVVAYKPGYKKFLEQCERDDDDDADADDIASDLARSRREL	579

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi1662g00030	579	SUPERFAMILY	TPR-like	398	549	IPR011990	GO:0005515
	Gabi1662g00030	579	Gene3D	Tetratricopeptide repeat domain	398	578	IPR011990	GO:0005515
	Gabi1662g00030	579	PANTHER	OXA1	99	341	IPR001708	GO:0016020\|GO:0032977
	Gabi1662g00030	579	CDD	5TM_Oxa1-like	121	325	-	-
	Gabi1662g00030	579	MobiDBLite	consensus disorder prediction	352	373	-	-
	Gabi1662g00030	579	MobiDBLite	consensus disorder prediction	352	383	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi1662g00030	218	359	Chloroplast and Mitochondria Gene Families	AT2G28800	27.465	7.35e-06	46.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi1662g00030	-		-	gmx:100797573	915.99