Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1657g00036 ATGGATGCCCCCAAGAATGACCAAAATGTTGTAACCGTAGATGTACATGCTGCCAAAGATCTGCTCAATTCATCTGGTTACTGTTATCTTGATGTGAGGTCGGTTGAGGATTTCAACAAAAGCCATGTTTTGAATGCTCATAATGTCCCCTATATGTTCATCACAGAAGAAGGACTGGTGAAAAATCCTGATTTTGTTGGCCAAGTAGCAGCAATATGCAAGAGTGAGGATCACTTAATTGTGGCTTGCAATAGAGGAGGAAGATCCCTCCCAGCCTGCGTTGATTTGCTTGACTCAGGATTTAAACATATTGTTAACATGGGGGGAGGCTACTCTACGTGGGTGGACGCTGGATTTGCCGGGAACCAGCCAGCAGAAGAGCTCAAAACTAGTTGCAAGTTCCGTCCTTAA 411 0.4453 MDAPKNDQNVVTVDVHAAKDLLNSSGYCYLDVRSVEDFNKSHVLNAHNVPYMFITEEGLVKNPDFVGQVAAICKSEDHLIVACNRGGRSLPACVDLLDSGFKHIVNMGGGYSTWVDAGFAGNQPAEELKTSCKFRP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1657g00036 136 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 119 IPR036873 -
Gabi1657g00036 136 Gene3D - 2 120 IPR036873 -
Gabi1657g00036 136 Pfam Rhodanese-like domain 18 116 IPR001763 -
Gabi1657g00036 136 SMART rhod_4 13 120 IPR001763 -
Gabi1657g00036 136 CDD RHOD 18 115 - -
Gabi1657g00036 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 3 124 IPR044684 GO:0003824
Gabi1657g00036 136 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1657g00036 Gabi-Chr1657 188988 190431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1657g00036 8 127 Sulfurtransferasese or Rhodanese AT5G66170 44.262 2.44e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1657g00036 K22547 - gmx:100794624 242.276