Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1657g00035 ATGGGAACGAGATCGCGGCAATCATGTCGAGACGAAGAAGAGGAGGAGCTGCTAGGTTGTGGAACCACGAGTAGAGGCGCTGATAACGCTTTTCTCAAATTGAACAATCTTGACATACACGGCGATGATGCTGGATCACCCGGAGCAGTTGCTAGCAAGAAGAAAAAGAGAGGCCAACGGGCTGTTGGAGGTGATAAGAGTGGAAGAGGGCTCCGCCAATTTAGTATGAAAGTTTGTGAGAAGGTAGAAAGCAAGGGAAGAACAACTTACAATGAGGTGGCAGATGAACTTGTGGCTGAATTTTCTGATCCAATCAATAGTGATTTGACCCCTGATCAGCAACAATATGATGAGAAAAACATTCGTCGAAGGGTCTATGATGCTCTGAATGTTCTCATGGCAATGGATATTATTTCCAAGGATAAAAAGGAAATACAATGGAGGGGTCTTCCTCGTACTAGTCAGAATGACATTGAAGAACTAAAGGCAGAGCGTCTTGGGCTCAGAAATAGAATTGAAAAGAAAGCAGCCTATCTGCAAGAGCTCGAGGAGCAATTTGTAGGTCTTCAGAGCCTTATAGAACGAAATGAGCAATTATATAGCTCAGGAAATCCTCCCAGCGGAGGTGTATCTTTACCTTTCATTCTGGTACAGACACGTCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTACATTTTGATTTCAATAGTACTCCTTTTGAGCTGCATTACGACAATTATGTTCTCAAGGCAATGAAATTTTGTGAGAGACCAGAGAGTGATAATATAACAAACAATATTACCAGTGGAGGTGAAGGTTCTAGCATGCCAGGCTTGTATCAGTCACAGGTTCCTCCTCCAGTTTCAAACGGGCCAGTTAGGCCTCCCACATCACCCCCACTTCCTGGAATATTAAAGGAACCGTTCCCCCGTTGTAGTAAGTGA 960 0.4375 MGTRSRQSCRDEEEEELLGCGTTSRGADNAFLKLNNLDIHGDDAGSPGAVASKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFSDPINSDLTPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWRGLPRTSQNDIEELKAERLGLRNRIEKKAAYLQELEEQFVGLQSLIERNEQLYSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHYDNYVLKAMKFCERPESDNITNNITSGGEGSSMPGLYQSQVPPPVSNGPVRPPTSPPLPGILKEPFPRCSK 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1657g00035 319 PANTHER TRANSCRIPTION FACTOR DP 24 288 IPR015648 GO:0005667|GO:0051726
Gabi1657g00035 319 MobiDBLite consensus disorder prediction 293 311 - -
Gabi1657g00035 319 FunFam Transcription factor-like protein DPB 155 279 - -
Gabi1657g00035 319 CDD DP_DD 154 257 IPR014889 -
Gabi1657g00035 319 Coils Coil 165 199 - -
Gabi1657g00035 319 Gene3D - 61 154 IPR036388 -
Gabi1657g00035 319 MobiDBLite consensus disorder prediction 1 19 - -
Gabi1657g00035 319 FunFam Transcription factor-like protein DPB 61 154 - -
Gabi1657g00035 319 Pfam Transcription factor DP 157 289 IPR014889 -
Gabi1657g00035 319 SUPERFAMILY "Winged helix" DNA-binding domain 69 150 IPR036390 -
Gabi1657g00035 319 SMART E2F_TDP_2 66 149 IPR003316 GO:0005667|GO:0006355
Gabi1657g00035 319 Pfam E2F/DP family winged-helix DNA-binding domain 69 149 IPR003316 GO:0005667|GO:0006355
Gabi1657g00035 319 Gene3D Transcription factor DP 155 281 IPR038168 -
Gabi1657g00035 319 SMART DP_2 156 316 IPR014889 -
Gabi1657g00035 319 SUPERFAMILY E2F-DP heterodimerization region 156 270 IPR037241 -
Gabi1657g00035 319 MobiDBLite consensus disorder prediction 268 319 - -
Gabi1657g00035 319 PIRSF Txn_factor_DP 2 313 IPR015648 GO:0005667|GO:0051726
Gabi1657g00035 319 MobiDBLite consensus disorder prediction 268 292 - -
Gabi1657g00035 319 MobiDBLite consensus disorder prediction 45 69 - -
Gabi1657g00035 319 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1657g00035 Gabi-Chr1657 183752 187848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1657g00035 67 258 E2F-DP Transcription Factor Family AT5G02470 55.440 9.52e-76 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Gabi1657g00035 DP 3.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1657g00035 K04683 - zju:107414839 493.426