Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1657g00031 ATGGCTTACATGTGTGCAGACAGTGGCAACCTTATGGCTATTGCTCAACAAGTTATCAAGCAGAAGCAGCAACAAGAGCAACAGCAGAACCACCATCATCAACAACATCAACAACATCATCAACAACAACAACAACACATGGGTGGTATTATCAACCCTCTATCTCTCCATCCATGGAACAATACTCCACCTTTGGGTTTTCCCCTCCCTCCAAACGAATTTCCGGATCCTTTTCAAGTCGGGTCGGGTCCCGACAACCCGGACCCTGCTTTTCAGTTCCCTCCCCTCGACCCTCATTCCGCCGCCTTTAGATTCTCCGATTTCGACTCCGACGAGTGGATGGACACCTTAATGGTCGCTGCCGACTCGACGGAACCACCCGCGTGGCAGAGCAATGTCGATTTTGGCCTTTACGCTTCCAACCCATTTGCGACCCGACTCTCCCCGCCGTCGGATCTCAACCGGGTCATCTTCTCTTCCGAATCTCAATCCACTATCCCTCTTCAACCCACTCAACTACCCACCCCGCCACCGCTATCTCCTCCACGCAAAGACCCTTTTCCGACGAAGGCCACAGTGCACAGAAACGACACCGTCGTCGTCGTCGGTGGCTCATCTGAAACAGAGTCTGCGCACCCGCTTCTGAAAGCGTTAACGGAGTGTGCTCTTCTCGCCGAGACTGAACCGGATCAGGCCTCAGAATCTCTTACCCATTTGAGGAAATCAGTGTCCCAGCATGGAAACCCTACACAGAGAGTTGCCTTCTACTTCTCCGAAGCTCTAACCCGCAAAATATCCATGGAGAAAGATAAAAAGAAGAACTTGGCAATGGTGGAAGCTACTACTACTACTACTATTACCACTACTTCGGAGGAGTTGACGCTATGTTATAAAGCTTTGAACGATGCTTGCCCTTATTCAAAGTTTGCACATTTAACTGCGAATCAAGCCATCTTGGAAGCCACGGAAGGAGCCACTAAGATTCACATCGTTGATTTTGGGATCGTGCAAGGGATTCAATGGGCAGCACTGTTGCAAGCATTTGCAACTCGTTCATCTGGGAAGCCTGAGAGTGTAAGGATTTCTGGGATACCAGCTATGGCTCTTGGAACTTCTCCTGGAACTTCTCTTTCAGCCACTGGGAATCGTCTCTCTGAGTTTGCAAAGCTTCTTGAGTTGAATTTCGAGTTTAGACCTATTTTGACCCCTATTCATGAGCTCAATGAGGGTAGCTTTTGTATTCAACCAAACGAGGCCTTGGCTGTTAACTTTATGCTTCAGTTGTATAATCTTTTGGATGAGAATTCAACTGCTGTGGAGACTGCACTTCGGTTAGCTAAGTCTTTGAACCCCAAGATTGTAACCCTTGGTGAGCATGAAGCAAGCTTGACCTGTGTTGGGTTTTTCCAACGGTTCAAGACTGCATTGAAGTATTTCTCAGCTTTGTTTGAGTCTCTGGAACCAAACTTGGAATCTGACTCGCCGGAAAGGTTCCAAGTGGAGAGTCTTCTGCTCGGCCGGCGTATCGCCGCCGTGATTGGGTCCGAGTTGCCGGGGAGTGTAAGAGAAAGGATGGAGGACAAAGAGCAGTGGAGGGTTCTGATGGAAAGATCTGGTTTTGAATCAGTGAGTTTCAGCCATTATGCAATTAGTCAAGCTAAGATGCTTTTGTGGAATTACAGCTATAGTTCTCTGTATTCTCTCATTGAATCTGAACCGGGTTTTTTGTCTCTGGCGTGGAAAGATGTCCCTCTCTTGACTGTTTCTTCGTGGCGTTAA 1779 0.4817 MAYMCADSGNLMAIAQQVIKQKQQQEQQQNHHHQQHQQHHQQQQQHMGGIINPLSLHPWNNTPPLGFPLPPNEFPDPFQVGSGPDNPDPAFQFPPLDPHSAAFRFSDFDSDEWMDTLMVAADSTEPPAWQSNVDFGLYASNPFATRLSPPSDLNRVIFSSESQSTIPLQPTQLPTPPPLSPPRKDPFPTKATVHRNDTVVVVGGSSETESAHPLLKALTECALLAETEPDQASESLTHLRKSVSQHGNPTQRVAFYFSEALTRKISMEKDKKKNLAMVEATTTTTITTTSEELTLCYKALNDACPYSKFAHLTANQAILEATEGATKIHIVDFGIVQGIQWAALLQAFATRSSGKPESVRISGIPAMALGTSPGTSLSATGNRLSEFAKLLELNFEFRPILTPIHELNEGSFCIQPNEALAVNFMLQLYNLLDENSTAVETALRLAKSLNPKIVTLGEHEASLTCVGFFQRFKTALKYFSALFESLEPNLESDSPERFQVESLLLGRRIAAVIGSELPGSVRERMEDKEQWRVLMERSGFESVSFSHYAISQAKMLLWNYSYSSLYSLIESEPGFLSLAWKDVPLLTVSSWR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1657g00031 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 587 IPR005202 -
Gabi1657g00031 592 Pfam GRAS domain family 215 592 IPR005202 -
Gabi1657g00031 592 ProSiteProfiles GRAS family profile. 205 592 IPR005202 -
Gabi1657g00031 592 MobiDBLite consensus disorder prediction 63 77 - -
Gabi1657g00031 592 MobiDBLite consensus disorder prediction 170 185 - -
Gabi1657g00031 592 MobiDBLite consensus disorder prediction 162 195 - -
Gabi1657g00031 592 MobiDBLite consensus disorder prediction 22 89 - -
Gabi1657g00031 592 MobiDBLite consensus disorder prediction 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1657g00031 Gabi-Chr1657 162771 165413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1657g00031 1 592 GRAS Transcription Factor Family AT5G66770 57.329 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi1657g00031 GRAS 3.7e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1657g00031 - - adu:107477343 786.563