Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1657g00004 ATGGAAGAAGGTGCTGGGTGGCTGACACCAACTTCAATTTTTCTCATCTTGTTTCTCTTTCTCTCTAAATATGTACTACTAAAGAGAAAAGCCAAGCATAGAAACCTACCACCTAGCCCACCTGCTTTACCACTCATAGGCCATCTCCATCTCATAAAAGAACCTCTCCACCGAAGTTTAGAAAAGCTCAAAGAAAAATATGGTCACATAATATTTCTCAAACTTGGAACACGCAAAGTCCTTGTTGTATCCTCACCTTCAGCAGTAGAAGAATGTTTAACAAAGAATGATATAACATTTGCAAACCGTCCCCAAACACTCGCTGGGAAATACCTCAACTACGATGGTAAGACAGTGGGGTTTGCTTCCTATGGCGACTATTGGCGCAACCTCCGGCGTCTAACAACCATTGAGCTTTTCTCAAACAATCGCCTTGGTATGTTCGCAAGAGTTCGAGAGGAAGAGATACAGTTGTTGGTGAAACAACTGTTTAAAGAATGCAAAGGATCACAAACTTCAAAGGTAAACCTCAGAGACAAACTTGTAGAGCTTTCTTTCAATATCATGTTAAGGATGCTCTCAGGGAAACGGTACTATGGTGATGATGTTATTGCACAAGAAGGGAAGGAATTCCAGAGTCTTATGAAGGAGTACGTAGAGCTTGTGGGAAGTGGAAATTTAAATGACTTCTTAACAATACTTCAATGGGTTGATTTCCAAGGTATCAAAAAGAAGATGGTGAAGGTGATGAACAAGATGGACATCTTCCTTCAGAACCTCATTGAGGAGCATCGCAGAAACAGGCGCGTGAGTTCAACAAAGGAACAAAGGAACATGACGATTATTGATCTTATGTTGGACCTGCAACGAGATGACCCACAATTCTACACGGAAGAAACTATCAAAGCTCTTATTCTGGCAATGCTTGTAGCTGGGTCTGAAACATCGGCTATTACCATGGAATGGTCACTGTCGCTTCTCCTCAACAATCCAGATGCAATGAAAAAGACTAGGTTTGAGATAGACACTTATGTGGGACAACATCATCTGTTGAACGAACTAGATACTGCAAAACTCAAATACCTGCAAAATGTAATTACCGAGACAATGCGCCTCTACCCTGTGGCTCCACTCATGATACCCCATGAGTCCTCTAAAGATTGCAAGGTTTGTGGTTTTGATATACCAGAAGGGACAATGCTATTTGTTAATCTATGGACCCTGCACAGGGACGCTGAGTGGTGGGTTGAACCAACAAGGTTTGAGCCAGAGAGATTTGAGAGAGGGGAAGGTTCTGATGTACTTTACAATATGATTCCATTTGGTATTGGAAGGAGAGCTTGCCCTGGAGCTCCTTTGGCAAAACGTGTTATGGGGCATGCATTAGGTGCCTTGATTCAGTGTTTTGAGTGGGAAAGAATTGGGGATCAAGAAATCAACATGATGGAAGGTGTAGGGCTTACCATGCCCAAAGTTGAGCCCTTGGTGGCCGTATGCAGGCCACGCCAAGGCATGATCAAGGTTCTGTCGAACATATAA 1539 0.4282 MEEGAGWLTPTSIFLILFLFLSKYVLLKRKAKHRNLPPSPPALPLIGHLHLIKEPLHRSLEKLKEKYGHIIFLKLGTRKVLVVSSPSAVEECLTKNDITFANRPQTLAGKYLNYDGKTVGFASYGDYWRNLRRLTTIELFSNNRLGMFARVREEEIQLLVKQLFKECKGSQTSKVNLRDKLVELSFNIMLRMLSGKRYYGDDVIAQEGKEFQSLMKEYVELVGSGNLNDFLTILQWVDFQGIKKKMVKVMNKMDIFLQNLIEEHRRNRRVSSTKEQRNMTIIDLMLDLQRDDPQFYTEETIKALILAMLVAGSETSAITMEWSLSLLLNNPDAMKKTRFEIDTYVGQHHLLNELDTAKLKYLQNVITETMRLYPVAPLMIPHESSKDCKVCGFDIPEGTMLFVNLWTLHRDAEWWVEPTRFEPERFERGEGSDVLYNMIPFGIGRRACPGAPLAKRVMGHALGALIQCFEWERIGDQEINMMEGVGLTMPKVEPLVAVCRPRQGMIKVLSNI 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1657g00004 512 Gene3D Cytochrome P450 28 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 FunFam Cytochrome P450 family protein 27 505 - -
Gabi1657g00004 512 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Gabi1657g00004 512 SUPERFAMILY Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00004 512 PANTHER CYTOCHROME P450 82C3-RELATED 16 502 - -
Gabi1657g00004 512 CDD CYP81 68 495 - -
Gabi1657g00004 512 Pfam Cytochrome P450 37 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1657g00004 Gabi-Chr1657 23805 28972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1657g00004 11 510 Cytochrome P450 AT4G37340 46.443 5.82e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1657g00004 - - gmx:100794610 733.406