Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1657g00003 ATGTCCAAATGGAAGAAGACACGAACAGAGTATAGAAACCACCCACCTAGCCCACCTGCCTTACCAGTTATAGGCCATCTCCATCTGATAGGAAAACCTCTACACAGAAGTCTGCATAATCTAACAGAGAAATATGGCCACATATTTCTTCTCCACCTTGGAACCCGAAATGTCCTCGTTGTGTCATCACCTTCTGCTGTAGAAGAATGCCTTTCCAAGAATGATATCACTTTTGCAAACCGTCCTCACACCCTTTCTGGGAAACACCTCAGTTACGATCATAAAGCACTGGGATCTGCTTCCTATGGCGACCATTGGCGCAACCTTCGCCGTCTAATAACAGTTGAACTGTTATCTACCAACCGTCTTGCCATGCTTGCAAGAATTCGAGAGGAAGAGATTCAACTGTTGGTGAAGCAACTATATGAAGAGTGCAAAGGAAACGTGTCAAAGGTGGTAGACATAAGGCCTAGACTGTTGGAGCTTTCTTTCAACATCATGCTAAGGATGATCTCTGGGAAAAGGTACTATGGGAAGGATGAGGTTTCCCAAGAAGGGAAAGAGTTCCAGTTTCTTATGAAAGAGTTCGCAGAGCTAAAAGGAAGTGGTAATTTGAATGACTTCTTTCCAATACTGCAATGGATTGATTTTCAAGGTGTGGAAAAGAGGATGGTGAAGTTGATGAACAAGATCGATAGCTTCTTTCAGAAACTCCTTGATGAGCACCGGAGAAACAGGAACATCAGTGCCGGAAAAGACCGAAGGAACATGTCGACGCTGATTGATACTATGTTGGATCTCCAAGACAAGGAACCAGAATTCTACACTAACGAAACTGTCAAAGGTGTTATTCTGGTAATGCTTGCTGCTGGAACTGAAACTTCGGCTACTACCTTGGAATGGGCACAGTCACTTCTCCTCAACCATCCAGAAGCAATGAATAAGACAATTGTTGAGATAGACTCTTGCGTGGGGCAAGATCACCTGTTGAACGAACTAGATACTCCCAAACTTAAATACTTGCAAAATGTAATTACCGAGACACTGCGTCTCTACCCTGTGGCTCCTCTCTTGATACCCCACGAGTCCTCTAAAGATTGCAATGTTTGTGGTTTTGATATACCAGCAGGGACAATGCTACTTGTTAATCTATGGACCCTGCACAGGGACCCTGAGTGGTGGGCAGAACCAACAAGGTTTGAGCCAGAGAGATTTGAGGGAGGGCAAGGTTGTGATGTACTTTACAATATGATTCCATTTGGTATTGGAAGGAGAGCTTGCCCTGGAGCTGCTTTGGCAAAACGTGTTATGGGACATGCATTAGGAGCCTTGATTCAGTGTTTTGAGTGGGAAAGAATTGGGGATCAAGAAATCAACATGATGGAGGGTGTAGGGCTTACCATGCCCAAAATTGAGCCTTTGGTGGCTTTATGCAGGCCACGCCAAAGCATGATCAAGGTTCTGTCGAATATATAA 1476 0.4438 MSKWKKTRTEYRNHPPSPPALPVIGHLHLIGKPLHRSLHNLTEKYGHIFLLHLGTRNVLVVSSPSAVEECLSKNDITFANRPHTLSGKHLSYDHKALGSASYGDHWRNLRRLITVELLSTNRLAMLARIREEEIQLLVKQLYEECKGNVSKVVDIRPRLLELSFNIMLRMISGKRYYGKDEVSQEGKEFQFLMKEFAELKGSGNLNDFFPILQWIDFQGVEKRMVKLMNKIDSFFQKLLDEHRRNRNISAGKDRRNMSTLIDTMLDLQDKEPEFYTNETVKGVILVMLAAGTETSATTLEWAQSLLLNHPEAMNKTIVEIDSCVGQDHLLNELDTPKLKYLQNVITETLRLYPVAPLLIPHESSKDCNVCGFDIPAGTMLLVNLWTLHRDPEWWAEPTRFEPERFEGGQGCDVLYNMIPFGIGRRACPGAALAKRVMGHALGALIQCFEWERIGDQEINMMEGVGLTMPKIEPLVALCRPRQSMIKVLSNI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1657g00003 491 PANTHER CYTOCHROME P450 82C3-RELATED 6 483 - -
Gabi1657g00003 491 Pfam Cytochrome P450 15 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 FunFam Cytochrome P450 family protein 5 484 - -
Gabi1657g00003 491 SUPERFAMILY Cytochrome P450 15 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 Gene3D Cytochrome P450 4 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 CDD CYP81 46 474 - -
Gabi1657g00003 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Gabi1657g00003 491 PRINTS E-class P450 group I signature 66 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS E-class P450 group I signature 42 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1657g00003 491 PRINTS E-class P450 group I signature 162 180 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1657g00003 Gabi-Chr1657 16758 22446 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1657g00003 7 488 Cytochrome P450 AT4G37330 47.119 3.83e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1657g00003 - - gmx:100794610 731.865