Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1650g00002 ATGAAAACCCATTTCCTCCTTTCCCTCCTATTCTTGACATCAACATTCTCCAATCTCCGCCCAACAGCCACCGCCGGCGAAGGTTACGGTTACGGCGACACCGGTTTCATCCGCACAAGTTGCAACACCACGCTGTACCCGGACGTGTGCTTCTCCTCCCTCTCTCGCTACGCCAGCGCCGTTCAGCAGAGCCCCGCCCACCTCGCTCGCGTCGCCATCGCCGTTACGCTCTCAAAAGCTCACCGCATCGCCTCCTACCTCTCCCGCCAAGCTGACTACGCCGCCGACGACTCCCGCGCCGTCTCCGCCGCCCTCCACGACTGCTCCGACAACCTCGACAACGCCGTCGACGAGATCCGCGACTCGCTCAGGCAGATGCGCCTGCTAGGAGCCGGTTCTGGTTCGGTGTCCGGTTCGTTCCGGTTCGGCATGAGCAACGTGCAGACGTGGATGAGCGCGGCGTTAACGGAGGAAGAGACCTGTACGGACGGGTTCGAGGACGTACCGAATGGTTCCCTGAAAACGGATGTATGCGATCGCGTCTCTAAGGTGAAGAAGTTCACGAGCAATGCTTTGGCGCTGGTGAATAGTTACGCTAACCAAGTAATGCCTTGA 615 0.5967 MKTHFLLSLLFLTSTFSNLRPTATAGEGYGYGDTGFIRTSCNTTLYPDVCFSSLSRYASAVQQSPAHLARVAIAVTLSKAHRIASYLSRQADYAADDSRAVSAALHDCSDNLDNAVDEIRDSLRQMRLLGAGSGSVSGSFRFGMSNVQTWMSAALTEEETCTDGFEDVPNGSLKTDVCDRVSKVKKFTSNALALVNSYANQVMP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1650g00002 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 194 - -
Gabi1650g00002 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 197 IPR035513 -
Gabi1650g00002 204 CDD PMEI-like_3 39 200 - -
Gabi1650g00002 204 SMART PMEI_2 32 194 IPR006501 GO:0004857
Gabi1650g00002 204 Pfam Plant invertase/pectin methylesterase inhibitor 36 194 IPR006501 GO:0004857
Gabi1650g00002 204 NCBIfam pectinesterase inhibitor domain 9 198 IPR006501 GO:0004857
Gabi1650g00002 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 198 IPR035513 -
Gabi1650g00002 204 FunFam Pectin methylesterase inhibitor 1 32 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1650g00002 Gabi-Chr1650 26725 27339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1650g00002 37 194 Carbohydrate Esterase AT5G53370 30.000 2.00e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1650g00002 - - gmx:100812251 248.054