Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1647g00001 ATGGATCACTCCCAAATAACAGCTATTGAGGACATTGACATGAGTGCGAGCTTAATTTTTTATGATGACATTGTTGATTTAGAGAAAGACAATACTGAGTTTGTTGATTTGGAGAAAGACAATGATGAGTTTGTTGACAATGATCAATGTGAAATTATGGAAGACGAAGATATGGATCATGTGCAAGATAATGCATTTGAAATTGTAGGAGATGATAACAATGAATTCAGTGAGACTAATTTTTTATGTAGGGTCTTTGGAATCTCAGGAGAAGCTTATGATTTTTATAATAATTATGCAAAAGGTAAGAGGTTCGGAATACGTAAGCAGTTCTCTAACAAGAGTGCAAAAACACAAGAAATATATAGGTGGAGATATGTGTGTTCAAAAGAAGGCGTCAAGAGAATAAATGATAAAGCGGTTAAAAGGCAAAGGGATACAAGGACCAATTGTTTAGCGATGTTACAGATAAAGTTGGTGGATGGAGTATGGAAAGTAGAGAAGTTCAATGATACACACAATCACCCATTAATTAACACTCCATCAAAGGTGAAGAAGTTTCCTTCTCAGAATGAATTACGACGAGTAAAAGTTGCTAAATCTCTTGTTTCTATGCTTTATGAGGAGGGTTTAACTTCTTCAAAGATCTCAAAGGTGGTGAATGCTACAGACAAAGAAGTTAACATTACTCCAGCTCAAATCACTAGTATTATATCAGTTCAGCGAAGGAATAATGTGGGGCGAGAATGTCAATGCATCATCAAGCACTTTCAAAGGAAGTCTACTCTTGATGGATCTTTTTATTTTAATATGCATTTGGCGGAAGATGGAACATTAAGAAGTGTATTCTGGGCAGATGGTAGGTCGAGAGCTGCATATGCTCAATTTGGTGATCTCTTTGTGTTTGATGTGACTTATCAAACGAATAAGTTCAAGTTTCCTTTTGCCCCTTTTGTTGGGGTTAATCATCATGGGCAATCAATTTTATTTGTTGCCGCTTTGTTAGAAGATGAAACGGAGGCAACATTTACTTGGTTGTTTGAACAGTTTCAGGCATGTATGTTTGACAAGTCTCCTCCTGCTATTATCACTGATCAAGATAAAGCTATTGGAAAAGCAATTGCCAAGATATTTCCCACAACACGACACCGTTTCTGTGCATGGCACATGAAAAAACATGTTATGGAACATACTCAAGCACTACACGCACAATTTAAGGAGAGTTTTGATGTTGACTTTCATGCGTGGTATAAAAGTCCAAGCATTGATGAGTTTGAAGACAAATGGGAATCATTGAGGACTAAATATGATATCAAACCAGGTACTTTGTTGTCTAACATGTATGCTTCACGTCATCATTGGGCAAAGACATATTTGAAAGATACTTTTTGGGCTGGAATGACCACAAGTGGCCGAAGTGAGAGTATCAATGCATTTTTTGATGGATATGTCAACTCCAACACAATGTTAAATGACTTTGTTACCCAATATGACAAAGCAATCAAGTGTAGGAGGGATGCCGAAGAAGATGAGGATTTTAAAACTAAAAATACAAAAGCAATTCTGGAGACTGCTCATGAAATTGAAGCAATAGCTGGTGAGCGCTACACAAGAAAAATATTTAATATCTTTAAAAAGGAGTGGATGGAAGCCGTACTTGACTATGAGCATAAAAAGATTTCAACGGACGAAAATAAAATCAGGTACAAGGTGGGGTCTCACAAAGTTGATAAAGAGTGGTGGACAATTGTTACATTCATTTGA 1764 0.3651 MDHSQITAIEDIDMSASLIFYDDIVDLEKDNTEFVDLEKDNDEFVDNDQCEIMEDEDMDHVQDNAFEIVGDDNNEFSETNFLCRVFGISGEAYDFYNNYAKGKRFGIRKQFSNKSAKTQEIYRWRYVCSKEGVKRINDKAVKRQRDTRTNCLAMLQIKLVDGVWKVEKFNDTHNHPLINTPSKVKKFPSQNELRRVKVAKSLVSMLYEEGLTSSKISKVVNATDKEVNITPAQITSIISVQRRNNVGRECQCIIKHFQRKSTLDGSFYFNMHLAEDGTLRSVFWADGRSRAAYAQFGDLFVFDVTYQTNKFKFPFAPFVGVNHHGQSILFVAALLEDETEATFTWLFEQFQACMFDKSPPAIITDQDKAIGKAIAKIFPTTRHRFCAWHMKKHVMEHTQALHAQFKESFDVDFHAWYKSPSIDEFEDKWESLRTKYDIKPGTLLSNMYASRHHWAKTYLKDTFWAGMTTSGRSESINAFFDGYVNSNTMLNDFVTQYDKAIKCRRDAEEDEDFKTKNTKAILETAHEIEAIAGERYTRKIFNIFKKEWMEAVLDYEHKKISTDENKIRYKVGSHKVDKEWWTIVTFI 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1647g00001 587 Pfam MULE transposase domain 300 392 IPR018289 -
Gabi1647g00001 587 Pfam FAR1 DNA-binding domain 94 178 IPR004330 -
Gabi1647g00001 587 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 84 563 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1647g00001 Gabi-Chr1647 16866 18711 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1647g00001 MULE 6.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1647g00001 - - lsv:128127215 549.666