Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1642g00029 ATGGCTGAAGAAAAACAAGATAATAAGCTGAAGCTGTATTCATATTGGAGGAGCTCAAGTTCCTTCCGAGTCCGAATTGCTCTCAACCTCAAAGGGCTCCAATATGAGTACAAAGCGGTCAATCTGTTGAAGGGAGAACAATCTCACCCCGAATTTCTCGAGCTCAATCCTGTTGGTTTTGTTCCCGTTCTAGTGGATGGCCATGCTGTAATTTTCGACTCTCTCGCCATTATTATGTATTTGGAGGATAAGTATCCTCAACAGCCTTTGCTCCCTTCTGATATTCATAAAAGAGCAATCAATTTCCAGGTTGCCAGTATTGTTTCCTCAACAATACATCCTCTTCATAACTTAAGTGTTCTGAATTACATCGGGGAAAAAGTTGGCCCTGATGAAAAACTTCCTTGGGCCCAAAGTATAATTAGAAGAGGCTTCACAGCACTTGAAAAGCTATTGAAAGACCACACAGGAAGATATGCAACTGGAGATGAAGTTTTCCTGGCGGATTTGTTTTTAGCATCTCAGTTATATGCCGCATTTAAGAGATTCAACATTCAAATGAATGAGTTCCCTATTCTATCAAGATTACATGAGACTTATTATGAGATCCCGGCATTCCGGGAAGCTTTACCAGATAACCAGCCAGATGCAGTACATTAG 660 0.4091 MAEEKQDNKLKLYSYWRSSSSFRVRIALNLKGLQYEYKAVNLLKGEQSHPEFLELNPVGFVPVLVDGHAVIFDSLAIIMYLEDKYPQQPLLPSDIHKRAINFQVASIVSSTIHPLHNLSVLNYIGEKVGPDEKLPWAQSIIRRGFTALEKLLKDHTGRYATGDEVFLADLFLASQLYAAFKRFNIQMNEFPILSRLHETYYEIPAFREALPDNQPDAVH 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1642g00029 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Gabi1642g00029 219 CDD GST_N_Zeta 10 82 IPR034333 -
Gabi1642g00029 219 PANTHER MALEYLACETOACETATE ISOMERASE 10 217 - -
Gabi1642g00029 219 SFLD Main (cytGST) 10 198 - -
Gabi1642g00029 219 Gene3D - 93 219 - -
Gabi1642g00029 219 Pfam Glutathione S-transferase, C-terminal domain 133 206 IPR004046 -
Gabi1642g00029 219 NCBIfam maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824|GO:0005737|GO:0009072
Gabi1642g00029 219 SUPERFAMILY Thioredoxin-like 7 92 IPR036249 -
Gabi1642g00029 219 SFLD Glutathione Transferase (cytosolic) 10 198 IPR040079 -
Gabi1642g00029 219 FunFam Glutathione S-transferase Z1 8 92 - -
Gabi1642g00029 219 SUPERFAMILY GST C-terminal domain-like 89 217 IPR036282 -
Gabi1642g00029 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Gabi1642g00029 219 FunFam Maleylacetoacetate isomerase 93 219 - -
Gabi1642g00029 219 Pfam Glutathione S-transferase, N-terminal domain 12 88 IPR004045 -
Gabi1642g00029 219 Gene3D Glutaredoxin 7 92 - -
Gabi1642g00029 219 CDD GST_C_Zeta 96 214 IPR034330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1642g00029 Gabi-Chr1642 228309 233324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1642g00029 9 217 Glutathione S-transferase Gene Family AT2G02380 61.244 2.57e-93 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1642g00029 K01800 - gmx:547590 369.777