Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1642g00028 ATGTCAACGGGTCAACCTGAAAATAAGCTGAAGCTCTATTCACACTGGATGAGCTCGTGTTCTTTTCGAGTCCGAATTGCTCTCAACCTCAAAGGGCTAAAATATGACTACGAAACGGTCAATCTCTCGATAATTTCTAATCCTGAGTTTCTGAAGCTCAATCCTGTTGGGTATGTTCCCGTTCTGGCGGATGGCGATGTAGTGATTGTTGACTCTTTTGCCATTATTATGTATTTGGAGGATAAGTATCCTCACAATCCATTGCTGCCTCTTGACATTCATAAAAGAGCAATCAATTTCCAGGTTGCCAACATTGTTTCCTCAGCTATACAGCCTTTTCAAAACCGAACTGTAGTGAAGTACATTGGGGAAAAAGTTGGCTCTGATGAAAAACTTCAATGGACCCAAAGCGCTATTGGAAAAGGCTTCAAGGCACTTGAAAAGCTATTAAAAGACCATGCAAGAAGATATGCAACTGGAGATGAAGTTTTCCTGGCAGATTTGTTTTTGGCGCCTCAGTTACATGCAGCATATATGATATACAACATTGACATGAAGGAATTCCCTATTCTATCAAGATTACATGAGACATATAATGAGATTCCGGCATTTCGGGAGGCTGTGCCAGAGAATCAGCCAGATGCAGTACACTAG 654 0.4128 MSTGQPENKLKLYSHWMSSCSFRVRIALNLKGLKYDYETVNLSIISNPEFLKLNPVGYVPVLADGDVVIVDSFAIIMYLEDKYPHNPLLPLDIHKRAINFQVANIVSSAIQPFQNRTVVKYIGEKVGSDEKLQWTQSAIGKGFKALEKLLKDHARRYATGDEVFLADLFLAPQLHAAYMIYNIDMKEFPILSRLHETYNEIPAFREAVPENQPDAVH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1642g00028 217 FunFam Glutathione S-transferase Z1 8 90 - -
Gabi1642g00028 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 217 IPR010987 -
Gabi1642g00028 217 SUPERFAMILY GST C-terminal domain-like 87 215 IPR036282 -
Gabi1642g00028 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Gabi1642g00028 217 FunFam Maleylacetoacetate isomerase 91 217 - -
Gabi1642g00028 217 Pfam Glutathione S-transferase, C-terminal domain 137 193 - -
Gabi1642g00028 217 Gene3D - 91 217 - -
Gabi1642g00028 217 PANTHER MALEYLACETOACETATE ISOMERASE 10 215 - -
Gabi1642g00028 217 SFLD Glutathione Transferase (cytosolic) 10 197 IPR040079 -
Gabi1642g00028 217 CDD GST_C_Zeta 94 212 IPR034330 -
Gabi1642g00028 217 Pfam Glutathione S-transferase, N-terminal domain 13 87 IPR004045 -
Gabi1642g00028 217 NCBIfam maleylacetoacetate isomerase 11 215 IPR005955 GO:0003824|GO:0005737|GO:0009072
Gabi1642g00028 217 SUPERFAMILY Thioredoxin-like 5 90 IPR036249 -
Gabi1642g00028 217 SFLD Main (cytGST) 10 197 - -
Gabi1642g00028 217 Gene3D Glutaredoxin 7 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1642g00028 Gabi-Chr1642 223296 227688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1642g00028 7 215 Glutathione S-transferase Gene Family AT2G02380 60.664 7.27e-91 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1642g00028 K01800 - gmx:100526991 327.405