Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1640g00004 ATGGAAAACGGTGTGGGAATAGAAGAGACAGTGAGAGAGTTGAGGCAATACTTCAAAACTGGAAAAACCAAAAGTGTGACATGGAGGAAAAACCAGCTCAAAGCTCTCCTTGACCTTCTTCATCACAATGAAGATGCTATGTTTAAGGCTCTCCACCAAGATCTTGGGAAGCACCCTGTTGAAGCTTACCGTGACGAGATTGGAGGGGTAGAAAAATCAGCCAACAACGCTTTGAGCAGCGTTGAAAAATGGATGGCACCAAAAAAGTGTAATGTACCTTTGCTTTTCTTCCCAGCTAAAGGAGAACTGTTGTCAGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAATTTCCCAATCATGGTGGCATTGGATCCATTAATTGGGGCAATATCTGCTGGAAATGTTGTAGTGATAAAACCTTCAGAGCAAGCTCCAGCATGCTCTTCTTTTCTTGCCAATACAATTCCTCGCTACTTGGACTCTAATGCCATCAAGGTGATCGAGGGTGGAGCAGATGTATGTGGACAACTACTGCTACAGAAATGGGACAAAATATTCTTCACTGGAAGTCCACGTGTGGCAAACATAGTCATGTCTGCTGCTGCAAAGAATTTAACTCCTGTTACTCTAGAGCTGGGTGGAAAATGCCCTGCCATACTTGATTCCCTTTCCAATCATTCAGATTTGAAGACTGCAGTGAAAAGAATTGTAGGAGCGAAGTGGGGATCTTGCGGCGGACAAGCATGTATAGGAATAGACTATGTGCTTGTTGAGCAGAAGTTCTCATCTGTTCTGATAGAACTATCGAAGAGTATACTCAGAAAATTTTATGGTGACAACCCAGTAGAGTCAAAGGCCATTTCGAGAATAGTAAACAAGCAGCATTTTGAGAGATTATGCAATCTTCTTAAAGATCCTCTTGTTGCGGCTTCCATTGTTCATGGTGGTTCAGTTGATGAAGAAAACCTGTTCGTTGAGCCAACAATCTTGTTAGATCCTCCACTAGACGCTCAGATAATGACTGAAGAAATCTTTGGCCCACTGCTTCCAGTGATCACAACGAATAAAATTCAGGAAAGTATTGAATTTATAAACTCAAGGCCGAAACCTCTTGCCATATATGCCTTCACCAAAGATGAAACTTTGAAGAGAAGGATTCTATCAGAAACCTCCTCAGGAAGTGTCACATTTAATGACACATTGATTCAATTTTTATGTGATACGCTACCATTTGGAGGTGTTGGCCAGAGTGGTTGTGGAAGGTACCATGGGAAGTACTCATTTGACACTTTCAGCCATGAGAAAGCTGTAATGCATGGAAACCTTTCCATTGAAATTGAGCCAAGGTACCCTCCTTGGAGTAAATTCAAGCTAGAGTTTATCAGATTGGCATACAGATTCAACTACTTTGGACTATTGCTGCACATGCTGGGCTTGAAAAGATACAACTAG 1458 0.4184 MENGVGIEETVRELRQYFKTGKTKSVTWRKNQLKALLDLLHHNEDAMFKALHQDLGKHPVEAYRDEIGGVEKSANNALSSVEKWMAPKKCNVPLLFFPAKGELLSEPLGVVLIFSSWNFPIMVALDPLIGAISAGNVVVIKPSEQAPACSSFLANTIPRYLDSNAIKVIEGGADVCGQLLLQKWDKIFFTGSPRVANIVMSAAAKNLTPVTLELGGKCPAILDSLSNHSDLKTAVKRIVGAKWGSCGGQACIGIDYVLVEQKFSSVLIELSKSILRKFYGDNPVESKAISRIVNKQHFERLCNLLKDPLVAASIVHGGSVDEENLFVEPTILLDPPLDAQIMTEEIFGPLLPVITTNKIQESIEFINSRPKPLAIYAFTKDETLKRRILSETSSGSVTFNDTLIQFLCDTLPFGGVGQSGCGRYHGKYSFDTFSHEKAVMHGNLSIEIEPRYPPWSKFKLEFIRLAYRFNYFGLLLHMLGLKRYN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1640g00004 485 FunFam Aldehyde dehydrogenase 216 419 - -
Gabi1640g00004 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Gabi1640g00004 485 PANTHER ALDEHYDE DEHYDROGENASE 7 477 IPR012394 GO:0006081
Gabi1640g00004 485 PIRSF ALDH 1 482 IPR012394 GO:0006081
Gabi1640g00004 485 FunFam Aldehyde dehydrogenase 15 219 - -
Gabi1640g00004 485 SUPERFAMILY ALDH-like 7 455 IPR016161 GO:0016491
Gabi1640g00004 485 Pfam Aldehyde dehydrogenase family 7 439 IPR015590 GO:0016491
Gabi1640g00004 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1640g00004 Gabi-Chr1640 161094 167002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1640g00004 7 483 Aldehyde Dehydrogenase Gene Family AT4G36250 62.474 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1640g00004 K00128 - gmx:100809812 851.662