Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1639g00004 ATGAGAGTTCCCATTTCCTCATCCCCACAGCCAAACCCAAAACTCACCCCAAACGTTGTCATCCACACCCCACCCAACATCATCATCAACAACAGCAACAACAACAATCATAATAATCCAACCTTGTGCTACGAACCCACCTCTGTTCTTGACCTCTGCAGGAGTCCTAGCCCTGAAAAAAAACCAACTGTCCCAAAGCCAGACCCAGAAGACCATCTAGAGCTGGAGGATCATGTGTTGCCTAATTTGGATTGGTGGGATTCCATCATGAAGGACTTGGGTTTACATGATGACCCTAACACACCCCTTTTGAAGAGTACTAACACTGATAACCTCAATTCCAATCCATGCATCCCTGATTTCCCACCTTCTCAAGACCCACCCTTTGATCACACACCAGATTTCACCACTCTCTCTGAAATTTACTCCAATCATAACCTGGCCTACAACTACAATAATAGCACTAATAATAACACTTTGGACCATTTGGTACATGACTTCAATCACCACCACCACATCAACAACAACAACAACAATAACAATAACAATAGCAATTGGGATTTCATTGAAGAGCTTATCCGTGCAGCTGATTGCTTTGACAGCAACAACCTACAACTTGCTCAGGCAATCTTGGAGCGGCTTAACCAACGGCTACGATCGCCTTCGGGTAAACCGCTCCACAGAGCAGCGTTTCACTTCAAAGACGCACTCCAATCGGTTCTCTCCGGTTCGAACCGGACGACAATTCCGTCGCGGCTTTCTTCCATGGCGGAGATCGTGCAAAACATCAAAACGTTCAAGGCGTTCTCGGGAATCTCACCGATCCCAATGTTCTCCATCTTCACAACTAATCAAGCACTCCTGGAAGCTCTCCATGGCTCATCCTTTATGCACGTCGTCGACTTCGAAATCGGCCTTGGCATCCAGTACGCTTCTCTCATGAAAGAGATCGCCGAGAAGGCCGGCGGAAACAACAACTCGCCGCTCCTCCGCATCACCGCCGTCGTGCCGGAAGAGTACGCCGTCGAGAGCCGCCTAATCCGTGAAAACCTCAACCAGTTCGCGCACGATCTCGGGATTCGTGTCCAGGTCGAGTTCGTGCCGCTTCGTACCTTCGAGACGGTGTCGTTTAAGGCCGTGAGATTCGTCGACGGCGAGAAGATAGCCGTACTGTTATCCCCGGCGATATTCTGCCACCTCGGCTCCGGCGGCAGCGGAAGCAGCACCGCCGCTTTTCTGGCTGACGTCCGGAGGATATCTCCCGCCGTGGTGGTGTTCGTCGACGGCGAGGGGTGGACTGAGGCTGTGGCGGCGGCGTCGTTTCGGCGCGCGGTGGTGAACAGCCTGGAGTTCTACTCGATGATGCTGGAATCGCTGGATGCGTCTGTTGTGTCAGGGGGAGGGGGCGATTGGGTGAGGAGGATCGAGATGCTTCTGCTGCGGCCGAAGATCTTTGCGGCGGTGGAAGGCGCCGGAAGAAGGGTTCCGCCGTGGAGGGAGGCGTTTTACGGCGCCGGAATGAGGCCGGTGCAGTTGAGCCAGTTCGCGGATTATCAAGCAGAGTGTTTGTTGGCGAAGGTGCAAATCAGAGGCTTCCACGTGGCAAAGCGACAGGCTGAGTTGGTGCTCTTCTGGCATGAGCGGGCCATGGTTGCCACGTCAGCTTGGCTCTGTTAG 1677 0.5307 MRVPISSSPQPNPKLTPNVVIHTPPNIIINNSNNNNHNNPTLCYEPTSVLDLCRSPSPEKKPTVPKPDPEDHLELEDHVLPNLDWWDSIMKDLGLHDDPNTPLLKSTNTDNLNSNPCIPDFPPSQDPPFDHTPDFTTLSEIYSNHNLAYNYNNSTNNNTLDHLVHDFNHHHHINNNNNNNNNNSNWDFIEELIRAADCFDSNNLQLAQAILERLNQRLRSPSGKPLHRAAFHFKDALQSVLSGSNRTTIPSRLSSMAEIVQNIKTFKAFSGISPIPMFSIFTTNQALLEALHGSSFMHVVDFEIGLGIQYASLMKEIAEKAGGNNNSPLLRITAVVPEEYAVESRLIRENLNQFAHDLGIRVQVEFVPLRTFETVSFKAVRFVDGEKIAVLLSPAIFCHLGSGGSGSSTAAFLADVRRISPAVVVFVDGEGWTEAVAAASFRRAVVNSLEFYSMMLESLDASVVSGGGGDWVRRIEMLLLRPKIFAAVEGAGRRVPPWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWLC 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1639g00004 558 ProSiteProfiles GRAS family profile. 179 557 IPR005202 -
Gabi1639g00004 558 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 175 552 IPR005202 -
Gabi1639g00004 558 Pfam GRAS domain family 189 556 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1639g00004 Gabi-Chr1639 151468 153715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1639g00004 72 556 GRAS Transcription Factor Family AT4G36710 52.964 5.59e-163 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi1639g00004 GRAS 6.8e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1639g00004 - - cam:101510420 754.207