Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1634g00011 ATGACGTTGTTGAATTTCCATGAACTGTGGAAGCCAGTTTTGGTGATGATTCTAGTTAATTTAGCTCTCGCTTTTGTCAATATATTTCTGAAGAAGGTTCTTAATGAAGGAATGGACTACTTGACCATCCTAACATATCGACAGGCAATTTCAGCAATTTTCTTGGCACCCATTGCTTTCTTCTATGAAAGGAAAAGCAAGCTAGAGGGTCAGATAATATGTCTCCTTTTCATAAGTGCACTTGTTGGAGTAACACTCACTCAATTCCTCTATCTTAAGGGACTTGAATACACATCTGCCACATTCGCATGTGCATTCCTCAACACAGTGCCTGTATTCGCCTTCATTTTGGCGCTGCCACTGGGGATAGAGAAGGTGAGCATGAAAAGCAAGAGTTCTAAAGCCAAGGTCTTGGGAACTTTTGTGTGCATTGGTGGAGCTTTGGTATTGATCCTTTATAAAGGAATGCCCTTAATGAACCCAAAATCACAGAACATAGTAGACAAAGGCACAATGAAACCATCAGGTTCAGAGTTAAAGCAATGGATTGTTGGCTCAATACTTCTGACTGCAGGTTGCCTCTTGTGGTCTTCATGGTTTCTTATACAAGCAAGGATTAGCAAAAAGTACCCCTATCAATACTCCAGCACTGCCATTTTGTCATTTTTTGCTGCCATTCAATCAGCAATATTAACTTTGATCATTGATAGAAATAGTGCCACATGGATTCTCAAAGGAAAGTTAGAAATCATGACTGTTATATATGCTGGACTTGTGGGATCAGGGTTGTGCTATGTGGCAATGTCATGGTGTGTGAAAGAAAGGGGTCCAGTTTTTACTGCAGCATTTACCCCTCTTCTACAGATGTTTGTGGCTGTGCTTGATTTCACTATGTTACAGGAGGAAATTTACCTTGGAAGTGTTGCAGGATCAGTTTTGGTTATTGCTGGCACTTATATTCTCCTATGGGGTAAAAGTAAAGAGGGAGAACAACAATGTGCCTTGAAGGATACTCAAGAAAATCAAGAAGATGAAGAATCTAAGCTAGGAGAGAATAAGAATTCTCTAAATTTCAAATGA 1080 0.3972 MTLLNFHELWKPVLVMILVNLALAFVNIFLKKVLNEGMDYLTILTYRQAISAIFLAPIAFFYERKSKLEGQIICLLFISALVGVTLTQFLYLKGLEYTSATFACAFLNTVPVFAFILALPLGIEKVSMKSKSSKAKVLGTFVCIGGALVLILYKGMPLMNPKSQNIVDKGTMKPSGSELKQWIVGSILLTAGCLLWSSWFLIQARISKKYPYQYSSTAILSFFAAIQSAILTLIIDRNSATWILKGKLEIMTVIYAGLVGSGLCYVAMSWCVKERGPVFTAAFTPLLQMFVAVLDFTMLQEEIYLGSVAGSVLVIAGTYILLWGKSKEGEQQCALKDTQENQEDEESKLGENKNSLNFK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1634g00011 359 MobiDBLite consensus disorder prediction 334 359 - -
Gabi1634g00011 359 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020
Gabi1634g00011 359 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020
Gabi1634g00011 359 MobiDBLite consensus disorder prediction 334 352 - -
Gabi1634g00011 359 PANTHER WAT1-RELATED PROTEIN 12 338 IPR030184 GO:0016020|GO:0022857
Gabi1634g00011 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Gabi1634g00011 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1634g00011 Gabi-Chr1634 137694 140703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1634g00011 1 330 Nodulin-like Gene Family AT1G11460 39.339 7.81e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1634g00011 - - gmx:100794199 575.089