Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1631g00020 ATGTTATCTAAGTTGCACTCAAATCCCTTTCTCCCAATTGCGCTTCCACGCCAGATTCAGTCTTCTTTGTTGAACAGTAAGTGCATCTCATTCACACATCCACATCCTCCGTCTCCATTCGAAGTTCATTATTATCACACAAGATTAAGAACAAGAAGAAGATCAAATTGCCGTTGTGGTTCTGGTTCTGGTTCGGGTTCCGGTTCCGATTCTGTTTCGGAAGGGCGTATGGCTGTTTCAAGTTTTCTCCAACAATTTGGGGTGTCCGAGGAAGATTCCCTATCCATCGCATCAAACTCACCCGCTTATCTGAACATGTTGATGGAAGGTGTGAGGGATTTGGAGCAGCTGTGGGATTTCGATTCTGATTCCGATAAACAAATTGCGGGCTCCAACTTCAAGGAGAAGCTTCTTCATATTGCTGCTCACAAAGGTGACAATGGGAAAGTTGCATACCTAGAGAGTCTGGGATTCACTCTCTCTTGGTCTATGAATCTCGCTAGATATCTATCTGATGACACCCTCCCCTCTCTCATGCACAAGGTTACATATATGAAGCAACTCACTCATTCTGATGAATTCCTTATCAAAAATATTCGCCGCATGATGCTCCACTTATCAATTTCAATTGACGAAGATCTACAACACACTCTATCCTTTTTCGAAAAGGTTGAAGCTAGGCGTGGAGGTTTAAACGTTTTGGCTTCCAAAGATTCCGCTTTCCATTATTTAGTTGAATCATTTCCCCGTCTACTTTTGTTATCAGTAAACAACCACATGACACGTACTGTGGATTTCCTCGAGAGTATAGGAATCCCCAGATTTCGCATCCCAAACATAATATTGGGTTTTCCTCCCATTCTGCTGTGGAATGTTCAAGTCCTGAAAACTAGAGTCCTAGCTTTGAATGAGATTGATGTGGTGGATAAAGATCATGTCAAGTTATTGCTAAAATATCCTTGGGTCCTATCTACAAGCATTCAAGAGAATTATAAGGAGATCCTTGACTTTTTATATTCCGAGCAGATTCCTAAGACATGGATAGATAGTGCAATCAAAAGCCAACCTCATCTATTGGGTTGTTCAACTAGCAAGCTGAAGTTGATGTTGGATCACATTGCTGAACTAGGAGTTCAAAGCAAAAAGTTGGATCGAGTTATTGCTAAAAGTCCTCAGCTACTATTACGGAAGCCGAAAGATTTTCTACAGGTTGTTCTGTTCTTCGAAAATATAGGTTTTGATAAAGAAACTATAGGGAGAATACTTGCCCGCTGCCCTGAAATTTTTGCTGCCAGCATTGATAAAACTCTACAGAGAAAGATTGAGTTCCTTTATGGGGTTGGTGTTTGTAAAACTTACCTTCCTAAGGTTATCAGAAAGTATCCAGAAGTACTTCTGTCTGACATTGACCAAACTTTACCGCAACGGATAATGTACTTGATGAAGTCAGGGATTTCAGAGAAAGACGTAGCATTTATGGTACGTACATTTTCTCCTCTCCTTGGGTACAGTATAGAGGAGGTTCTGAGACCAAAAATAGAATTCCTGGTAAACTCAATGGAGAGGCCACTAGGAGATGTGGTGGACTACCCTAGGTATTTTAGCTATTCATTAGAAAAGAGGATAAAGCCAAGACATTGGGTGCTGAAAGGAAGGAATATCGAATGTAGCTTAAAGGATATGTTGGGAAAAAATGATGAAGAGTTTGCCTGTGACTTTATGGGTGTCGGAGGGATGCTCGATCCTCCTCCTCCTCCTCCATCTTCTCATGATAGGTTGTAA 1782 0.4119 MLSKLHSNPFLPIALPRQIQSSLLNSKCISFTHPHPPSPFEVHYYHTRLRTRRRSNCRCGSGSGSGSGSDSVSEGRMAVSSFLQQFGVSEEDSLSIASNSPAYLNMLMEGVRDLEQLWDFDSDSDKQIAGSNFKEKLLHIAAHKGDNGKVAYLESLGFTLSWSMNLARYLSDDTLPSLMHKVTYMKQLTHSDEFLIKNIRRMMLHLSISIDEDLQHTLSFFEKVEARRGGLNVLASKDSAFHYLVESFPRLLLLSVNNHMTRTVDFLESIGIPRFRIPNIILGFPPILLWNVQVLKTRVLALNEIDVVDKDHVKLLLKYPWVLSTSIQENYKEILDFLYSEQIPKTWIDSAIKSQPHLLGCSTSKLKLMLDHIAELGVQSKKLDRVIAKSPQLLLRKPKDFLQVVLFFENIGFDKETIGRILARCPEIFAASIDKTLQRKIEFLYGVGVCKTYLPKVIRKYPEVLLSDIDQTLPQRIMYLMKSGISEKDVAFMVRTFSPLLGYSIEEVLRPKIEFLVNSMERPLGDVVDYPRYFSYSLEKRIKPRHWVLKGRNIECSLKDMLGKNDEEFACDFMGVGGMLDPPPPPPSSHDRL 593
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi1631g00020 593 PANTHER CGI-12 PROTEIN-RELATED 169 380 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 SMART mt_12 384 414 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 SMART mt_12 455 486 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 SMART mt_12 278 308 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 SMART mt_12 419 450 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 SMART mt_12 349 379 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 SMART mt_12 242 273 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 SMART mt_12 491 523 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 SMART mt_12 524 555 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 Pfam mTERF 264 570 IPR003690 GO:0003690|GO:0006355
Gabi1631g00020 593 FunFam Mitochondrial transcription termination factor family protein 364 577 - -
Gabi1631g00020 593 Gene3D Transcription termination factor 3, mitochondrial 363 577 IPR038538 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi1631g00020 Gabi-Chr1631 126281 133096 Dispersed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi1631g00020 mTERF 4.5e-95 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1631g00020 K15031 - gmx:100802127 737.258