Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1631g00011 ATGAATGTATATGTATACTTATTTGTGTATTTTGCAGTTGGTCAAACCAATTTAATGTTTATTCAGGTTCTGATGGACTTTCCACAACTTACAATGACATTGCCTGATGGTCGTGAAGAATCTGCCATGAAGCGTACAACACTAGTGGCTAACACTTCAAATATGCCAGTGGCTGCTCGTGAAGCTTCAATTTATACAGGTATCACTTTAGCTGAGTATTTTAGAGACATGGGTTACAATGTCAGCATGATGGCAGATTCAACATCTAGATGGGCTGAAGCATTGCGTGAAATCTCTGGACGGCAGGCAGAAATGCCTGCAGATAGTGGATATCCTGCGTACCTTGCTGCACGTTTAGCCTCTTTCTATGAACGTGCTGGGAAAGTTAAATGTCTTGGAGGTCCTGAACGTACTGGTAGTGTCACAATTGTTGGTGCTGTTTCTCCTCCTGGAGGAGACTTTTCAGATCCTGTGACGTCTGCAACCCTCAGCATAGTTCAGGTTTTCTGGGGTTTGGACAAAAAGCTTGCTCAGAGGAAGCATTTTCCTTCTGTGAACTGGCTTATTTCTTATTCAAAGTACTCAACGGCATTGGAATCCTTTTACGAGCAATTTGATCCAGACTTTATAAACATTAGGACAAAGGCTCGTGAAGTGCTGCAAAGAGAAGATGACCTGAATGAAATTGTCCAGCTTGTAGGTAAGGATGCCTTAGCTGAAGGAGACAAGATCACCTTAGAAACTGCAAAGCTTCTGAGAGAGGATTATCTTGCACAAAATGCTTTCTCCCCATATGACAAATTCTGTCCCTTCTACAAGTCTGTTTGGATGATGCGCAACATTATCCATTTTTACAATTTGGCAAATCAGGCAGTAGAGAGGGGAGCTGGTACAGATGGTCAGAAGATAACTTACAGCCTCATCAAGAGTTAA 933 0.4212 MNVYVYLFVYFAVGQTNLMFIQVLMDFPQLTMTLPDGREESAMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRQAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFSPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGTDGQKITYSLIKS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1631g00011 310 FunFam V-type proton ATPase catalytic subunit A 193 310 - -
Gabi1631g00011 310 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 8 192 IPR000194 GO:0005524
Gabi1631g00011 310 CDD ATP-synt_V_A-type_alpha_C 209 310 - -
Gabi1631g00011 310 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 8 309 IPR022878 GO:0046034|GO:0046961
Gabi1631g00011 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 196 IPR027417 -
Gabi1631g00011 310 Gene3D - 196 309 IPR024034 -
Gabi1631g00011 310 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 205 288 - -
Gabi1631g00011 310 ProSitePatterns ATP synthase alpha and beta subunits signature. 183 192 IPR020003 GO:0005524
Gabi1631g00011 310 Gene3D - 3 195 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1631g00011 Gabi-Chr1631 33712 38097 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1631g00011 9 309 Primary Pumps ATPases(2) AT1G78900 93.355 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1631g00011 K02145 - pvy:116116295 568.155