Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1615g00015 ATGGAATTTGATTACGGTAAACAGCAACAAAGCTGCACATTTCGAGAGCTGAAGTTGGTTGCCTTAATTGCTCTATGTCTCATTCTAATCTCTCCTGCTGAGGCATTTGATCCACTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCCTGGACATCAGATGGTTATTTGGCCACTGTGACATTGTTTAACTTTCAACTTTACCGGAATATTATGAACCCTGGTTGGACTCTAGGATGGACATGGGCAAAAAAGGAAATTATATGGGCCATGATGGGAGCTCAAGCTACAGAACAAGGAAACTGTGCCAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGAACCCTGAAGTGGTTGACTTGTTACCTGGAGCTTCTTACAACATGCAGTTTAACAATTGCTGTAGAGGGGGTGTTCTAACATCTTGGGGGCAGGATCCTAATGGTGCAGTTTCAGCATTTCAAATAGGTGTGGGGCTCTCTGGCACCTCTAATAAGACAGTGAAACTGCCCAAGAACTTCAAATTGCTAGGACCAGGACCAGGATATTCATGTGGCCCTGCAAAGATGGTTCCTTCCACTGTCATCCCTACAGATGATCATAGGAGAAAAACTCAAGCTTTGATGTCCTGGAATGTGACATGTACTTATTCACAGTTCCTTGCCTTTAAGAACCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACCAAGTCACAGCTTGCCCAACTTGTGCTTGTGGTTGTCAGAACAATGATACCTGTGTCACGAGCGACTCAAAGATCCTGCAAGATTATGTAAAAAACACTACGAAGACACATGATATCACACCAAAACCATTGTTACAATGTACACACCATTTGTGCCATGTCCGGGTGCATTGGCATGTGAAAGACAACTATAAGGATTATTGGCGTGTGAAGATTGCAATCATCAACTTCAACTATCGAATGAATTACACACAATGGACACTTGTAGTACAACATCCCAATCTCAATAATGTCACCCAAGTCTATAGCTTTGAATACATTCCACTTCTTCCCTATGAATCCATAAATGACACAGGCATGTTCTATGGTTTGAAATATTACAATGATCTATTGATGGAAGCTGGGCCTAAAGGGAATGTCCAATCTGAGGTGCTTATGAAGAAGGACAAGAACACATTTACTCTCAAGCGAGGATGGGCTTTTCCTAGGAGGGTTTACTTCAATGGTGATGAATGTATGCTGCCACCCCCTGATTCATACCCTTTCTTGCCAAACTCTGCACGTAGATTACCAACAAGTATTATATTGATGGCAGCCCATGTGATTTTCACATCATTTTTTCATTTGATTGTGACTCTTTTGTGA 1371 0.4187 MEFDYGKQQQSCTFRELKLVALIALCLILISPAEAFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGNCAKFKLKIPHSCKRNPEVVDLLPGASYNMQFNNCCRGGVLTSWGQDPNGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKMVPSTVIPTDDHRRKTQALMSWNVTCTYSQFLAFKNPSCCVSLSSFYSDQVTACPTCACGCQNNDTCVTSDSKILQDYVKNTTKTHDITPKPLLQCTHHLCHVRVHWHVKDNYKDYWRVKIAIINFNYRMNYTQWTLVVQHPNLNNVTQVYSFEYIPLLPYESINDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKRGWAFPRRVYFNGDECMLPPPDSYPFLPNSARRLPTSIILMAAHVIFTSFFHLIVTLL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1615g00015 456 PIRSF COBRA 9 455 IPR006918 GO:0010215|GO:0016020
Gabi1615g00015 456 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
Gabi1615g00015 456 PANTHER PROTEIN COBRA 24 441 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1615g00015 Gabi-Chr1615 237700 240404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1615g00015 11 450 COBRA Gene Family AT3G02210 58.691 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1615g00015 - - gmx:100813134 842.802