Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1615g00014 ATGGAGTGTATATGGTTCTCTAACGTTGTATCTGTTGTCCCTCGTGGTGGCTTTGTAGTTTTACTCCTTTTACTACTCTCTTGCTCCACATTCACTTCTACAGAAGCCTATGATGCGCTTGATCCAACTGGCAATATAACAATGAAATGGGATGTCATTAGCTGGACCCCAGATGGCTATGTTGCTGTTGTTACAATGTTCAACTTTCAACAGTATCGCCATATTCAGGCTCCTGGATGGTCATTACAGTGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGATGGGAGCACAAACCACAGAACAAGGAGATTGCTCAAAGTTCAAAGCAGGAATCCCACATTGTTGTAAGAAGGACCCAACAGTAGTGGATTTACTGCCAGGAACTCCTTACAATCAGCAAATTGCAAATTGTTGCAAAGGGGGAGTCTTAAATTCATGGGCTCAGGATCCAAGCACTGCAGTAAGTTCTTTTCAGATTAGTGTTGGTTCTGCTGGAACAACTAACAAAACTGTCAAACTGCCAAAAAATTTCACACTCAAAGCACCAGGACCTGGTTATACTTGTGGCCCTGCAAAAATTGTGAGACCAACTAAATTTATTACCACTGACAAGAGGAGAACCACCCAAGCCTTGATGACCTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGTCACCAAGTTGTTGTGTTTCCCTCTCTTCCTTCTACAATGAGACAATAGTAAACTGCCCAACCTGCACCTGTGGCTGCCAAAACAAAACAGAACCCAACAGTTGTGTAAATCCAGATTCCCCACATTTAGCTTCAGTTGTTTCATCGTCAGGCAAGGCTATAAATACACCTCTAGTCCAGTGTACTAGCCATATGTGTCCTATTCGAGTGCATTGGCATGTGAAGCTCAATTATAAAGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAATTACAGAATGAACTACACACAATGGAATCTTGTTGTCCAGCACCCCAATTTTGATAATCTTACCGAGATTTTCAGCTTTTATTACAAGTCACTGACACCCTATGAGGGATTAAATGATACAGGTATGTTATGGGGAGTCAAATTCTACAATGATTTTCTTTCTTCAGCTGGATCCCTTGGTAATGTGCAGTCAGAACTCTTATTTAAAAAGGACAAATCAACCTTCACTTTTGATAAAGGATGGGCTTTCCCAAGAAGGGTTTATTTCAATGGGGATATGTGTGTTATGCCTCCTCCTGATGCCTACCCTTGGCTGCCAAATGCAAGTTCAAAACTAGTTTTCTCTTTACTTAGTACAGTCATAGCCACTTTAGCTTCTTTGTTAATCTTATTGAATTAA 1362 0.4075 MECIWFSNVVSVVPRGGFVVLLLLLLSCSTFTSTEAYDALDPTGNITMKWDVISWTPDGYVAVVTMFNFQQYRHIQAPGWSLQWTWAKKEVIWNMMGAQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPSTAVSSFQISVGSAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVRPTKFITTDKRRTTQALMTWNITCTYSQFLAQKSPSCCVSLSSFYNETIVNCPTCTCGCQNKTEPNSCVNPDSPHLASVVSSSGKAINTPLVQCTSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYTQWNLVVQHPNFDNLTEIFSFYYKSLTPYEGLNDTGMLWGVKFYNDFLSSAGSLGNVQSELLFKKDKSTFTFDKGWAFPRRVYFNGDMCVMPPPDAYPWLPNASSKLVFSLLSTVIATLASLLILLN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1615g00014 453 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0016020
Gabi1615g00014 453 PANTHER PROTEIN COBRA 25 442 IPR006918 GO:0010215|GO:0016020
Gabi1615g00014 453 PIRSF COBRA 9 453 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1615g00014 Gabi-Chr1615 233494 236596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1615g00014 48 439 COBRA Gene Family AT5G60920 81.013 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1615g00014 - - gmx:100815779 852.047