Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1615g00010 ATGGTGCTGGGAACAGCAGCATGGAGAAACGTGCGTATTCTCCGAACTAGTTTTAGTTTGAGTTTGAGTTTCTCCACCACTCATTACAGGAAACAAATTTCACTCGCCAATCTCTTCAAAATGTACGGTTTTCCCACTTCCCACATTCTCACCTTTCTCTCTCAAAATCCCTTTCTCTTCAATTACGATCTTGCCCACTTACACAAATCACTCGCCACTCTCTTTTCCTTCAGAATTCCCCAGAAGAATCTTGTTTCCCTCATACGCGACTGCCCCGGAGTGTTGGAATACCAATTCCTCAGGAATTGGGAATTGGGTTTCTCGGAATTGAAATCACGGGTTCCGAGCCATTCCCCTTTGATGCTCGTGAACTTGTTGCAATGTTCTAGGAGGTTTCAGTTAGACCCAGTGGAGATTTCCAGGAAAGTTGAGATCTTGAAGGGTTTAGGGTTTTCTGGTGCCGTCATGGCTAGGGTTTTGGAGGGTTTCCCCAGTGTGGTTGTGATGAGTGAGAGGGAAATTGTTTGTGTGATTGAGTTTCTTGTAGAGTTTGGGGTCCCCAGTGATGAGGTTGATCGAGTTGTTGGGATGTATCCTAGGGTTTTGGGATTTGGGGTTGAAGACAGGTTGAAGCCCTTGATTCAGGAATTGAAGGGTTTGGGGTTTTCAGGGCGTGAGGTTAGAAAAGAGATTGTCAGGGAACCTAGGATTCTGGGAATGGAGATTGGGGAATTTTCGCGGTGTTTGAAGTTGCTGGAGAGTTTAAAATGCAGAGAAGCAATCAAAGAGAGGATTTTTGGAGAGGGTTTATTCAGGGCTTGTTTTGAAGTGAAACTGAGAGTGGATTGTTTGTGTGGTCATGGTTTGATTCGTAGAGATGCTTTTAAGGTGTTGTGGAAAGAACCAAGGTTGATTGCTTATGATGTGGAGGATATTGAGAAGAAGATTGAGTTTTTGGTGCACAGGATGAAATATGGTGTTGATTGTTTGCTTGATGTTCCTGAATACTTGGGTGTGAATTTTGAAAAACAGATTGTTCCTAGATACAATGTGATGGAGTATTTGAAAGCAAAAGGTGCAATTGGTCTTGAGGTTGGATTGAAGGACATGATCAAGCCCACTAGGCTTAGATTTTACAATCTTTACGTCAAGCCCTATCCAGAGTGTGAAAAAATATATGGAAGATTTTCAGGAAATGTTGAAGTTAAAATTAAGCATCCAGCTGGACTTTGGAAACTCTTTAAACCACAGAAGTTCCCTGAAACTGATGAAGATGTGAAGAACATGAAGTCCTTCATGGAATCATTGGTGTAG 1314 0.4247 MVLGTAAWRNVRILRTSFSLSLSFSTTHYRKQISLANLFKMYGFPTSHILTFLSQNPFLFNYDLAHLHKSLATLFSFRIPQKNLVSLIRDCPGVLEYQFLRNWELGFSELKSRVPSHSPLMLVNLLQCSRRFQLDPVEISRKVEILKGLGFSGAVMARVLEGFPSVVVMSEREIVCVIEFLVEFGVPSDEVDRVVGMYPRVLGFGVEDRLKPLIQELKGLGFSGREVRKEIVREPRILGMEIGEFSRCLKLLESLKCREAIKERIFGEGLFRACFEVKLRVDCLCGHGLIRRDAFKVLWKEPRLIAYDVEDIEKKIEFLVHRMKYGVDCLLDVPEYLGVNFEKQIVPRYNVMEYLKAKGAIGLEVGLKDMIKPTRLRFYNLYVKPYPECEKIYGRFSGNVEVKIKHPAGLWKLFKPQKFPETDEDVKNMKSFMESLV 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1615g00010 437 SMART mt_12 228 258 IPR003690 GO:0003690|GO:0006355
Gabi1615g00010 437 SMART mt_12 122 152 IPR003690 GO:0003690|GO:0006355
Gabi1615g00010 437 SMART mt_12 327 361 IPR003690 GO:0003690|GO:0006355
Gabi1615g00010 437 SMART mt_12 157 187 IPR003690 GO:0003690|GO:0006355
Gabi1615g00010 437 SMART mt_12 50 80 IPR003690 GO:0003690|GO:0006355
Gabi1615g00010 437 SMART mt_12 192 223 IPR003690 GO:0003690|GO:0006355
Gabi1615g00010 437 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Gabi1615g00010 437 FunFam Transcription termination factor MTERF15 mitochondrial 169 393 - -
Gabi1615g00010 437 Pfam mTERF 133 245 IPR003690 GO:0003690|GO:0006355
Gabi1615g00010 437 Pfam mTERF 279 378 IPR003690 GO:0003690|GO:0006355
Gabi1615g00010 437 Gene3D Transcription termination factor 3, mitochondrial 9 180 IPR038538 -
Gabi1615g00010 437 Gene3D Transcription termination factor 3, mitochondrial 181 396 IPR038538 -
Gabi1615g00010 437 PANTHER CGI-12 PROTEIN-RELATED 105 386 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi1615g00010 mTERF 2.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1615g00010 - - pcin:129319850 599.356